IGVFFI3725SWMW

released
validated
File Set
IGVFDS5066GYDY(RNA-seq: transcriptome alignments)
Summary
GRCh38 filtered transcriptome alignments
Analysis Step Version
File Format
bam
Content Type
transcriptome alignments
Content Summary
filtered transcriptome alignments
Aliases
charles-gersbach:cd8-tcells-rna-seq-chronic-activation-batf3-bam-rep2
md5sum
01dd06ceadd9833419625711ae82fdf5
Content MD5sum
2a1edb6fa4a94017f4b9cfc8b089b735
File Size
1.2 GB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/processed_data/AIM_2_T_cell_project_1/cd8-pSM65-IL-2-D2.star2.Aligned.out.sorted.bam

Alignment Details

Reference Files
Filtered
True

Samples

3 items
Sample Terms
Summary
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library

Files This File Derives From

2 items
fastq
reads
Charles Gersbach, Duke
1.3 GB
validated
fastq
reads
Charles Gersbach, Duke
1.4 GB
validated

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
transcript quantifications
GRCh38 transcript quantifications
Charles Gersbach, Duke
505 KB
validated

Attribution