IGVFFI2041YQHB

released
validated
File Set
IGVFDS6344XBAV(ATAC-seq integrating a control transduction expression vector library and an expression vector library of BATF3)
Summary
GRCh38 filtered alignments
Analysis Step Version
File Format
bam
Content Type
alignments
Content Summary
filtered alignments
Aliases
charles-gersbach:cd8-tcells-atac-seq-chronic-activation-batf3-bam-rep1
md5sum
f4fc9359d3599bddde5fbe0c15037824
Content MD5sum
4d41b17529c26194c2a18d25edfeced6
File Size
1.9 GB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/processed_data/AIM_2_T_cell_project_1/SCM-C70-rep1.masked.dups_marked.bam
Checkfiles Version
Attribution

Alignment Details

Reference Files
Filtered
True
Genome Assembly
GRCh38

Samples

4 items
Sample Terms
Summary
PrimaryCell
Homo sapiens CD8-positive, alpha-beta memory T cell treated with 300 percent Antibody Coated Bead for 14 days, transduced (lentivirus) with a expression vector library
PrimaryCell
Homo sapiens CD8-positive, alpha-beta memory T cell treated with 300 percent Antibody Coated Bead for 14 days, transduced (lentivirus) with a expression vector library
PrimaryCell
Homo sapiens CD8-positive, alpha-beta memory T cell treated with 300 percent Antibody Coated Bead for 14 days, transduced (lentivirus) with a expression vector library
PrimaryCell
Homo sapiens CD8-positive, alpha-beta memory T cell treated with 300 percent Antibody Coated Bead for 14 days, transduced (lentivirus) with a expression vector library

Files This File Derives From

2 items
fastq
reads
Charles Gersbach, Duke
1.5 GB
validated
fastq
reads
Charles Gersbach, Duke
1.5 GB
validated

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
peak quantifications
GRCh38 peak quantifications
Charles Gersbach, Duke
2.2 MB
validated