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IGVFFI1698LKKR

released
validated
File Set
IGVFDS4769QTGM(single-cell ATAC-seq (SHARE-seq), single-cell RNA sequencing assay (SHARE-seq))
Summary
GRCm39 unfiltered alignments
Analysis Step Version
/analysis-step-versions/39c0498d-91f6-42de-8896-2fab1403f032/
File Format
bam
Content Type
alignments
Content Summary
unfiltered alignments
Aliases
buenrostro-bernstein:IGVFDS4769QTGM_bam
md5sum
f1635fe03048bef913038bbe99975479
Content MD5sum
cb8d19d38279f6f40578f10ebaac8526
File Size
6.1 GB
Submitted File Name
gs://fc-9649faf8-a4ec-4ca4-a975-498a1707d03c/submissions/a6d4a8e2-651e-421f-ae34-bfdf4cf1f42e/single_cell_pipeline/e5388b35-8930-49ab-a59f-e57e72b28278/call-atac/wf_atac/60c7c6a3-129f-4fff-90da-9ddb46c5b409/call-generate_bam/SS-PKR-132.bam
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad

Alignment Details

Reference Files
Genome Assembly
GRCm39

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 132)

Files This File Derives From

18 items
yaml
seqspec
Jason Buenrostro, Broad
1.2 KB
validated
yaml
seqspec
Jason Buenrostro, Broad
1.2 KB
validated
yaml
seqspec
Jason Buenrostro, Broad
1.2 KB
validated
yaml
seqspec
Jason Buenrostro, Broad
1.2 KB
validated
yaml
seqspec
Jason Buenrostro, Broad
1.2 KB
validated
yaml
seqspec
Jason Buenrostro, Broad
1.2 KB
validated
fastq
reads
Jason Buenrostro, Broad
2.0 GB
validated
fastq
reads
Jason Buenrostro, Broad
1.1 GB
validated
fastq
reads
Jason Buenrostro, Broad
423 MB
validated
fastq
reads
Jason Buenrostro, Broad
362 MB
validated

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
bai
index
index of IGVFFI1698LKKR
Jason Buenrostro, Broad
2.7 MB
validated