IGVFFI0916WHTV

released

validated

File Set

IGVFDS2716FVEL(CRISPR interference FACS screen targeting B2M: alignments)

Summary

custom assembly unfiltered alignments

Analysis Step Version

/analysis-step-versions/f9f6ae88-d515-4e49-9902-deea3cf87703/

File Format

bam

Content Type

alignments

Content Summary

unfiltered alignments

Aliases

charles-gersbach:cd8-tcells-alignment-crispri-b2m-high-bin-rep1

md5sum

49c5ee6570951e87ca584c3f0ae0ccdd

Content MD5sum

2e3950d58253f8ded60ffaf81e52cd43

File Size

14 MB

Submitted File Name

/data/reddylab/Alex/IGVF/data_submissions/processed_data/AIM_2_T_cell_project_1/B2M-High-R1_S5.sorted.bam

Alignment Details

Reference Files

IGVFFI9036JJXB

Samples

6 items

Sample Terms

Summary

IGVFSM1190UUKW

PrimaryCell

CD8-positive, alpha-beta memory T cell

CD8-positive, alpha-beta memory T cell, Homo sapiens (sorting details: FACS bin for 0-10% expression of b2m) modified with CRISPRi Sa-dCas9, transduced (lentivirus) with a guide library (MOI of 0.4)

IGVFSM3073WHFV

PrimaryCell

CD8-positive, alpha-beta memory T cell

CD8-positive, alpha-beta memory T cell, Homo sapiens (sorting details: FACS bin for 0-10% expression of b2m) modified with CRISPRi Sa-dCas9, transduced (lentivirus) with a guide library (MOI of 0.4)

IGVFSM3427LEEW

PrimaryCell

CD8-positive, alpha-beta memory T cell

CD8-positive, alpha-beta memory T cell, Homo sapiens (sorting details: FACS bin for 0-10% expression of b2m) modified with CRISPRi Sa-dCas9, transduced (lentivirus) with a guide library (MOI of 0.4)

IGVFSM4508IIAY

PrimaryCell

CD8-positive, alpha-beta memory T cell

CD8-positive, alpha-beta memory T cell, Homo sapiens (sorting details: FACS bin for 90-100% expression of b2m) modified with CRISPRi Sa-dCas9, transduced (lentivirus) with a guide library (MOI of 0.4)

IGVFSM6062UNTJ

PrimaryCell

CD8-positive, alpha-beta memory T cell

IGVFSM7452ZWAU

PrimaryCell

CD8-positive, alpha-beta memory T cell