middle temporal gyrus — IGVFSM9808ARBE

preview
1{
2    "@context": "/terms/",
3    "@id": "/tissues/IGVFSM9808ARBE/",
4    "@type": [
5        "Tissue",
6        "Biosample",
7        "Sample",
8        "Item"
9    ],
10    "accession": "IGVFSM9808ARBE",
11    "age": "82",
12    "age_units": "year",
13    "aliases": [
14        "igvf:corces_tissue_BANN0437_MTG"
15    ],
16    "audit": {
17        "INTERNAL_ACTION": [
18            {
19                "category": "mismatched status",
20                "detail": "Preview tissue [IGVFSM9808ARBE](/tissues/IGVFSM9808ARBE/) has in progress subobject phenotype term [DOID_14330](/phenotype-terms/DOID_14330/).",
21                "level": 30,
22                "level_name": "INTERNAL_ACTION",
23                "name": "audit_item_status",
24                "path": "/tissues/IGVFSM9808ARBE/"
25            },
26            {
27                "category": "mismatched status",
28                "detail": "Preview tissue [IGVFSM9808ARBE](/tissues/IGVFSM9808ARBE/) has in progress subobject phenotype term [DOID_2377](/phenotype-terms/DOID_2377/).",
29                "level": 30,
30                "level_name": "INTERNAL_ACTION",
31                "name": "audit_item_status",
32                "path": "/tissues/IGVFSM9808ARBE/"
33            },
34            {
35                "category": "mismatched status",
36                "detail": "Preview tissue [IGVFSM9808ARBE](/tissues/IGVFSM9808ARBE/) has in progress subobject phenotype term [DOID_9246](/phenotype-terms/DOID_9246/).",
37                "level": 30,
38                "level_name": "INTERNAL_ACTION",
39                "name": "audit_item_status",
40                "path": "/tissues/IGVFSM9808ARBE/"
41            },
42            {
43                "category": "missing CCF ID",
44                "detail": "Tissue [IGVFSM9808ARBE](/tissues/IGVFSM9808ARBE/) is missing a `ccf_id`. Human tissues are expected to specify a common coordinate framework identifier (CCF ID).",
45                "level": 30,
46                "level_name": "INTERNAL_ACTION",
47                "name": "audit_tissue_ccf_id",
48                "path": "/tissues/IGVFSM9808ARBE/"
49            }
50        ]
51    },
52    "award": {
53        "@id": "/awards/HG012076/",
54        "component": "mapping"
55    },
56    "classifications": [
57        "tissue"
58    ],
59    "creation_timestamp": "2025-03-19T04:08:34.269335+00:00",
60    "date_obtained": "2022-10-24",
61    "disease_terms": [
62        {
63            "@id": "/phenotype-terms/MONDO_0004975/",
64            "status": "released",
65            "term_name": "Alzheimer disease"
66        },
67        {
68            "@id": "/phenotype-terms/DOID_14330/",
69            "status": "in progress",
70            "term_name": "Parkinson's disease"
71        },
72        {
73            "@id": "/phenotype-terms/DOID_9246/",
74            "status": "in progress",
75            "term_name": "cerebral amyloid angiopathy"
76        },
77        {
78            "@id": "/phenotype-terms/DOID_2377/",
79            "status": "in progress",
80            "term_name": "multiple sclerosis"
81        }
82    ],
83    "donors": [
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85            "@id": "/human-donors/IGVFDO8155MCUV/",
86            "accession": "IGVFDO8155MCUV",
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91        }
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106            "summary": "single-nucleus ATAC-seq (10x multiome)"
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326                "title": "Ryan Corces, Gladstone Institute UCSF"
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354                "title": "Ryan Corces, Gladstone Institute UCSF"
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623        {
624            "@id": "/multiplexed-samples/IGVFSM9455XPMQ/",
625            "accession": "IGVFSM9455XPMQ",
626            "status": "preview"
627        },
628        {
629            "@id": "/multiplexed-samples/IGVFSM8027AHHD/",
630            "accession": "IGVFSM8027AHHD",
631            "status": "preview"
632        },
633        {
634            "@id": "/multiplexed-samples/IGVFSM1888IYGT/",
635            "accession": "IGVFSM1888IYGT",
636            "status": "preview"
637        }
638    ],
639    "origin_of": [],
640    "parts": [],
641    "pmi": 135,
642    "pmi_units": "minute",
643    "pooled_in": [],
644    "preservation_method": "flash-freezing",
645    "protocols": [
646        "https://www.protocols.io/view/isolation-of-nuclei-from-frozen-tissue-for-snmulti-6uchesw"
647    ],
648    "sample_terms": [
649        {
650            "@id": "/sample-terms/UBERON_0002771/",
651            "status": "preview",
652            "term_name": "middle temporal gyrus"
653        }
654    ],
655    "schema_version": "21",
656    "sex": "female",
657    "sorted_fractions": [],
658    "sources": [
659        {
660            "@id": "/sources/banner-health/",
661            "status": "released",
662            "title": "Banner Health"
663        }
664    ],
665    "status": "preview",
666    "submitted_by": {
667        "@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
668        "title": "Ryan Corces"
669    },
670    "summary": "Homo sapiens (female, 82 years) middle temporal gyrus tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy, multiple sclerosis",
671    "taxa": "Homo sapiens",
672    "upper_bound_age": 82,
673    "upper_bound_age_in_hours": 718320,
674    "uuid": "40a65b40-517f-4d34-a0b8-2e2a5fb1fce0",
675    "virtual": false
676}