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putamen — IGVFSM9425DRXU
putamen — IGVFSM9425DRXU
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Summary
Homo sapiens (male, 80 years) putamen tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy
Sample Terms
putamen
Sex
male
Age
80 years
Disease Terms
Alzheimer disease
Post-mortem Interval
200 minutes
Preservation Method
flash-freezing
Taxa
Homo sapiens
Sources
banner-health
Date Harvested
February 22, 2023
Aliases
igvf:corces_tissue_BANN0129_PUT
Protocols
https://www.protocols.io/view/isolation-of-nuclei-from-frozen-tissue-for-snmulti-6uchesw
Attribution
Ryan Corces, Gladstone Institute UCSF
(
HG012076
—
Ansuman Satpathy
)
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO4191KJBR
igvf:corces_donor_BANN0129
male
Homo sapiens
File Sets
32 items
1
2
3
4
Accession
Summary
Aliases
Lab
IGVFDS0058HQMM
single-nucleus RNA sequencing assay (10x multiome)
igvf:corces_measurementSet_RP014_G4_RNA
Ryan Corces, Gladstone Institute UCSF
IGVFDS0957VZJU
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_RP014_G6_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS1158PFBA
single-nucleus RNA sequencing assay (10x multiome)
igvf:corces_measurementSet_X040_G8_RNA
Ryan Corces, Gladstone Institute UCSF
IGVFDS1310RPDD
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_X040_G4_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS1992IYHH
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_X040_G3_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS2033BVMC
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_X040_G2_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS2731RLBA
single-nucleus RNA sequencing assay (10x multiome)
igvf:corces_measurementSet_RP014_G7_RNA
Ryan Corces, Gladstone Institute UCSF
IGVFDS2806EVXQ
single-nucleus RNA sequencing assay (10x multiome)
igvf:corces_measurementSet_X040_G1_RNA
Ryan Corces, Gladstone Institute UCSF
IGVFDS2943LQHU
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_RP014_G3_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS3071BBZO
single-nucleus RNA sequencing assay (10x multiome)
igvf:corces_measurementSet_RP014_G2_RNA
Ryan Corces, Gladstone Institute UCSF
Multiplexed In Samples
16 items
1
2
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM0496VQZI
MultiplexedSample
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 78 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 14 more samples
IGVFSM1109QIDV
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (female, 83 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (male, 78 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 10 more samples
IGVFSM1867DNXU
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (female, 83 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (male, 78 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 10 more samples
IGVFSM3192MEUT
MultiplexedSample
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 78 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 14 more samples
IGVFSM3718ZLPR
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (female, 83 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (male, 78 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 10 more samples
IGVFSM4901QTFI
MultiplexedSample
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 78 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 14 more samples
IGVFSM5142KRLD
MultiplexedSample
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 78 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 14 more samples
IGVFSM6104DPZN
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (female, 83 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (male, 78 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 10 more samples
IGVFSM7148SYPE
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (female, 83 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (male, 78 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 10 more samples
IGVFSM7243MOJZ
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (female, 83 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (male, 78 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 10 more samples