middle temporal gyrus — IGVFSM9360EUXG

{
    "@context": "/terms/",
    "@id": "/tissues/IGVFSM9360EUXG/",
    "@type": [
        "Tissue",
        "Biosample",
        "Sample",
        "Item"
    ],
    "accession": "IGVFSM9360EUXG",
    "age": "82",
    "age_units": "year",
    "aliases": [
        "igvf:corces_tissue_BANN0217_MTG_B1"
    ],
    "audit": {
        "INTERNAL_ACTION": [
            {
                "category": "mismatched status",
                "detail": "Preview tissue [IGVFSM9360EUXG](/tissues/IGVFSM9360EUXG/) has in progress subobject phenotype term [DOID_14330](/phenotype-terms/DOID_14330/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/tissues/IGVFSM9360EUXG/"
            },
            {
                "category": "missing CCF ID",
                "detail": "Tissue [IGVFSM9360EUXG](/tissues/IGVFSM9360EUXG/) is missing a `ccf_id`. Human tissues are expected to specify a common coordinate framework identifier (CCF ID).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_tissue_ccf_id",
                "path": "/tissues/IGVFSM9360EUXG/"
            }
        ]
    },
    "award": {
        "@id": "/awards/HG012076/",
        "component": "mapping"
    },
    "classifications": [
        "tissue"
    ],
    "creation_timestamp": "2025-03-19T12:57:46.797782+00:00",
    "date_obtained": "2022-11-22",
    "disease_terms": [
        {
            "@id": "/phenotype-terms/DOID_14330/",
            "status": "in progress",
            "term_name": "Parkinson's disease"
        }
    ],
    "donors": [
        {
            "@id": "/human-donors/IGVFDO3971UIZC/",
            "accession": "IGVFDO3971UIZC",
            "ethnicities": [
                "European"
            ],
            "status": "preview"
        }
    ],
    "file_sets": [
        {
            "@id": "/measurement-sets/IGVFDS4661FUFW/",
            "accession": "IGVFDS4661FUFW",
            "aliases": [
                "igvf:corces_measurementSet_X018_G1_ATAC"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus ATAC-seq (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS8385AJOG/",
            "accession": "IGVFDS8385AJOG",
            "aliases": [
                "igvf:corces_measurementSet_X018_G1_RNA"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS5235WVGK/",
            "accession": "IGVFDS5235WVGK",
            "aliases": [
                "igvf:corces_measurementSet_RP004_G8_ATAC"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus ATAC-seq (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS6968NEVU/",
            "accession": "IGVFDS6968NEVU",
            "aliases": [
                "igvf:corces_measurementSet_RP004_G8_RNA"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS5398QLMU/",
            "accession": "IGVFDS5398QLMU",
            "aliases": [
                "igvf:corces_measurementSet_X018_G2_ATAC"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus ATAC-seq (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS3606KJNK/",
            "accession": "IGVFDS3606KJNK",
            "aliases": [
                "igvf:corces_measurementSet_X018_G2_RNA"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS6716ODJI/",
            "accession": "IGVFDS6716ODJI",
            "aliases": [
                "igvf:corces_measurementSet_X018_G5_ATAC"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus ATAC-seq (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS6107ITVM/",
            "accession": "IGVFDS6107ITVM",
            "aliases": [
                "igvf:corces_measurementSet_X018_G5_RNA"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS7460ZJLL/",
            "accession": "IGVFDS7460ZJLL",
            "aliases": [
                "igvf:corces_measurementSet_X018_G7_ATAC"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus ATAC-seq (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS4267COKK/",
            "accession": "IGVFDS4267COKK",
            "aliases": [
                "igvf:corces_measurementSet_X018_G7_RNA"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS8509DVUL/",
            "accession": "IGVFDS8509DVUL",
            "aliases": [
                "igvf:corces_measurementSet_X018_G8_ATAC"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus ATAC-seq (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS5209HPZQ/",
            "accession": "IGVFDS5209HPZQ",
            "aliases": [
                "igvf:corces_measurementSet_X018_G8_RNA"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS8282BSIR/",
            "accession": "IGVFDS8282BSIR",
            "aliases": [
                "igvf:corces_measurementSet_X018_G3_ATAC"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus ATAC-seq (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS6864WUVY/",
            "accession": "IGVFDS6864WUVY",
            "aliases": [
                "igvf:corces_measurementSet_X018_G3_RNA"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS3229AGXN/",
            "accession": "IGVFDS3229AGXN",
            "aliases": [
                "igvf:corces_measurementSet_X018_G4_ATAC"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus ATAC-seq (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS3746KFOG/",
            "accession": "IGVFDS3746KFOG",
            "aliases": [
                "igvf:corces_measurementSet_X018_G4_RNA"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS8237XHKO/",
            "accession": "IGVFDS8237XHKO",
            "aliases": [
                "igvf:corces_measurementSet_X018_G6_ATAC"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus ATAC-seq (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS3609ZOOP/",
            "accession": "IGVFDS3609ZOOP",
            "aliases": [
                "igvf:corces_measurementSet_X018_G6_RNA"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS0356QKID/",
            "accession": "IGVFDS0356QKID",
            "aliases": [
                "igvf:corces_measurementSet_RP004_G5_ATAC"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus ATAC-seq (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS9072MPPD/",
            "accession": "IGVFDS9072MPPD",
            "aliases": [
                "igvf:corces_measurementSet_RP004_G5_RNA"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS7451ZVNG/",
            "accession": "IGVFDS7451ZVNG",
            "aliases": [
                "igvf:corces_measurementSet_RP004_G6_ATAC"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus ATAC-seq (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS3523VMTT/",
            "accession": "IGVFDS3523VMTT",
            "aliases": [
                "igvf:corces_measurementSet_RP004_G6_RNA"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS8426LZVO/",
            "accession": "IGVFDS8426LZVO",
            "aliases": [
                "igvf:corces_measurementSet_RP004_G1_ATAC"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus ATAC-seq (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS8995MLTF/",
            "accession": "IGVFDS8995MLTF",
            "aliases": [
                "igvf:corces_measurementSet_RP004_G1_RNA"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS7782SATY/",
            "accession": "IGVFDS7782SATY",
            "aliases": [
                "igvf:corces_measurementSet_RP004_G4_ATAC"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus ATAC-seq (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS6700ZMGV/",
            "accession": "IGVFDS6700ZMGV",
            "aliases": [
                "igvf:corces_measurementSet_RP004_G4_RNA"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS0549PHUZ/",
            "accession": "IGVFDS0549PHUZ",
            "aliases": [
                "igvf:corces_measurementSet_RP004_G2_ATAC"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus ATAC-seq (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS9604EHJY/",
            "accession": "IGVFDS9604EHJY",
            "aliases": [
                "igvf:corces_measurementSet_RP004_G2_RNA"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS3710XUSS/",
            "accession": "IGVFDS3710XUSS",
            "aliases": [
                "igvf:corces_measurementSet_RP004_G3_ATAC"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus ATAC-seq (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS0332EHYL/",
            "accession": "IGVFDS0332EHYL",
            "aliases": [
                "igvf:corces_measurementSet_RP004_G3_RNA"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS0455VVOE/",
            "accession": "IGVFDS0455VVOE",
            "aliases": [
                "igvf:corces_measurementSet_RP004_G7_ATAC"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus ATAC-seq (10x multiome)"
        },
        {
            "@id": "/measurement-sets/IGVFDS2877JGNS/",
            "accession": "IGVFDS2877JGNS",
            "aliases": [
                "igvf:corces_measurementSet_RP004_G7_RNA"
            ],
            "file_set_type": "experimental data",
            "lab": {
                "title": "Ryan Corces, Gladstone Institute UCSF"
            },
            "preferred_assay_title": "10x multiome",
            "status": "preview",
            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
        }
    ],
    "institutional_certificates": [
        {
            "@id": "/institutional-certificates/f7742e0d-bba4-4ca3-ab80-71c7364f24e7/",
            "certificate_identifier": "IP115-05",
            "controlled_access": false,
            "status": "in progress"
        }
    ],
    "lab": {
        "@id": "/labs/ryan-corces/",
        "title": "Ryan Corces, Gladstone Institute UCSF"
    },
    "lower_bound_age": 82,
    "lower_bound_age_in_hours": 718320,
    "multiplexed_in": [
        {
            "@id": "/multiplexed-samples/IGVFSM3747OUVO/",
            "accession": "IGVFSM3747OUVO",
            "status": "preview"
        },
        {
            "@id": "/multiplexed-samples/IGVFSM3933PDRB/",
            "accession": "IGVFSM3933PDRB",
            "status": "preview"
        },
        {
            "@id": "/multiplexed-samples/IGVFSM9798GLTM/",
            "accession": "IGVFSM9798GLTM",
            "status": "preview"
        },
        {
            "@id": "/multiplexed-samples/IGVFSM7341PDKY/",
            "accession": "IGVFSM7341PDKY",
            "status": "preview"
        },
        {
            "@id": "/multiplexed-samples/IGVFSM6380FYLN/",
            "accession": "IGVFSM6380FYLN",
            "status": "preview"
        },
        {
            "@id": "/multiplexed-samples/IGVFSM5218YFIX/",
            "accession": "IGVFSM5218YFIX",
            "status": "preview"
        },
        {
            "@id": "/multiplexed-samples/IGVFSM3692IOZZ/",
            "accession": "IGVFSM3692IOZZ",
            "status": "preview"
        },
        {
            "@id": "/multiplexed-samples/IGVFSM7256WFWF/",
            "accession": "IGVFSM7256WFWF",
            "status": "preview"
        },
        {
            "@id": "/multiplexed-samples/IGVFSM8022FKWE/",
            "accession": "IGVFSM8022FKWE",
            "status": "preview"
        },
        {
            "@id": "/multiplexed-samples/IGVFSM1516CHMP/",
            "accession": "IGVFSM1516CHMP",
            "status": "preview"
        },
        {
            "@id": "/multiplexed-samples/IGVFSM9792MUYY/",
            "accession": "IGVFSM9792MUYY",
            "status": "preview"
        },
        {
            "@id": "/multiplexed-samples/IGVFSM5141FLXJ/",
            "accession": "IGVFSM5141FLXJ",
            "status": "preview"
        },
        {
            "@id": "/multiplexed-samples/IGVFSM5502KZTB/",
            "accession": "IGVFSM5502KZTB",
            "status": "preview"
        },
        {
            "@id": "/multiplexed-samples/IGVFSM9557IMSU/",
            "accession": "IGVFSM9557IMSU",
            "status": "preview"
        },
        {
            "@id": "/multiplexed-samples/IGVFSM5358MDTC/",
            "accession": "IGVFSM5358MDTC",
            "status": "preview"
        },
        {
            "@id": "/multiplexed-samples/IGVFSM1427BZIP/",
            "accession": "IGVFSM1427BZIP",
            "status": "preview"
        }
    ],
    "origin_of": [],
    "part_of": "/tissues/IGVFSM7918XVXZ/",
    "parts": [],
    "pmi": 180,
    "pmi_units": "minute",
    "pooled_in": [],
    "preservation_method": "flash-freezing",
    "protocols": [
        "https://www.protocols.io/view/isolation-of-nuclei-from-frozen-tissue-for-snmulti-6uchesw"
    ],
    "sample_terms": [
        {
            "@id": "/sample-terms/UBERON_0002771/",
            "status": "preview",
            "term_name": "middle temporal gyrus"
        }
    ],
    "schema_version": "21",
    "sex": "female",
    "sorted_fractions": [],
    "sources": [
        {
            "@id": "/sources/banner-health/",
            "status": "released",
            "title": "Banner Health"
        }
    ],
    "status": "preview",
    "submitted_by": {
        "@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
        "title": "Ryan Corces"
    },
    "summary": "Homo sapiens (female, 82 years) middle temporal gyrus tissue associated with Parkinson's disease",
    "taxa": "Homo sapiens",
    "upper_bound_age": 82,
    "upper_bound_age_in_hours": 718320,
    "uuid": "3a3624ff-f818-4f92-a961-eb6fd895b671",
    "virtual": false
}