middle temporal gyrus — IGVFSM9292YPAO

preview
1{
2    "@context": "/terms/",
3    "@id": "/tissues/IGVFSM9292YPAO/",
4    "@type": [
5        "Tissue",
6        "Biosample",
7        "Sample",
8        "Item"
9    ],
10    "accession": "IGVFSM9292YPAO",
11    "age": "83",
12    "age_units": "year",
13    "aliases": [
14        "igvf:corces_tissue_BANN1317_MTG"
15    ],
16    "audit": {
17        "INTERNAL_ACTION": [
18            {
19                "category": "mismatched status",
20                "detail": "Preview tissue [IGVFSM9292YPAO](/tissues/IGVFSM9292YPAO/) has in progress subobject phenotype term [DOID_14330](/phenotype-terms/DOID_14330/).",
21                "level": 30,
22                "level_name": "INTERNAL_ACTION",
23                "name": "audit_item_status",
24                "path": "/tissues/IGVFSM9292YPAO/"
25            },
26            {
27                "category": "missing CCF ID",
28                "detail": "Tissue [IGVFSM9292YPAO](/tissues/IGVFSM9292YPAO/) is missing a `ccf_id`. Human tissues are expected to specify a common coordinate framework identifier (CCF ID).",
29                "level": 30,
30                "level_name": "INTERNAL_ACTION",
31                "name": "audit_tissue_ccf_id",
32                "path": "/tissues/IGVFSM9292YPAO/"
33            }
34        ]
35    },
36    "award": {
37        "@id": "/awards/HG012076/",
38        "component": "mapping"
39    },
40    "classifications": [
41        "tissue"
42    ],
43    "creation_timestamp": "2025-03-19T04:14:14.698376+00:00",
44    "date_obtained": "2023-02-22",
45    "disease_terms": [
46        {
47            "@id": "/phenotype-terms/DOID_14330/",
48            "status": "in progress",
49            "term_name": "Parkinson's disease"
50        }
51    ],
52    "donors": [
53        {
54            "@id": "/human-donors/IGVFDO4053HEKW/",
55            "accession": "IGVFDO4053HEKW",
56            "ethnicities": [
57                "European"
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59            "status": "preview"
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68            ],
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72            },
73            "preferred_assay_title": "10x multiome",
74            "status": "preview",
75            "summary": "single-nucleus ATAC-seq (10x multiome)"
76        },
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103            "summary": "single-nucleus ATAC-seq (10x multiome)"
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116            "status": "preview",
117            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
118        },
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124            ],
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127                "title": "Ryan Corces, Gladstone Institute UCSF"
128            },
129            "preferred_assay_title": "10x multiome",
130            "status": "preview",
131            "summary": "single-nucleus ATAC-seq (10x multiome)"
132        },
133        {
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138            ],
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141                "title": "Ryan Corces, Gladstone Institute UCSF"
142            },
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144            "status": "preview",
145            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
146        },
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152            ],
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155                "title": "Ryan Corces, Gladstone Institute UCSF"
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158            "status": "preview",
159            "summary": "single-nucleus ATAC-seq (10x multiome)"
160        },
161        {
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166            ],
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169                "title": "Ryan Corces, Gladstone Institute UCSF"
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173            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
174        },
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179                "igvf:corces_measurementSet_X040_G4_ATAC"
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183                "title": "Ryan Corces, Gladstone Institute UCSF"
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211                "title": "Ryan Corces, Gladstone Institute UCSF"
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215            "summary": "single-nucleus ATAC-seq (10x multiome)"
216        },
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221                "igvf:corces_measurementSet_X040_G6_RNA"
222            ],
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225                "title": "Ryan Corces, Gladstone Institute UCSF"
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229            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
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239                "title": "Ryan Corces, Gladstone Institute UCSF"
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244        },
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250            ],
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253                "title": "Ryan Corces, Gladstone Institute UCSF"
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257            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
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313            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
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323                "title": "Ryan Corces, Gladstone Institute UCSF"
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341            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
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351                "title": "Ryan Corces, Gladstone Institute UCSF"
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610    "parts": [],
611    "pmi": 180,
612    "pmi_units": "minute",
613    "pooled_in": [],
614    "preservation_method": "flash-freezing",
615    "protocols": [
616        "https://www.protocols.io/view/isolation-of-nuclei-from-frozen-tissue-for-snmulti-6uchesw"
617    ],
618    "sample_terms": [
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627    "sorted_fractions": [],
628    "sources": [
629        {
630            "@id": "/sources/banner-health/",
631            "status": "released",
632            "title": "Banner Health"
633        }
634    ],
635    "status": "preview",
636    "submitted_by": {
637        "@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
638        "title": "Ryan Corces"
639    },
640    "summary": "Homo sapiens (male, 83 years) middle temporal gyrus tissue associated with Parkinson's disease",
641    "taxa": "Homo sapiens",
642    "upper_bound_age": 83,
643    "upper_bound_age_in_hours": 727080,
644    "uuid": "d54dd9d8-e452-4725-a87a-cf7c1d583847",
645    "virtual": false
646}