posterior cingulate gyrus — IGVFSM9177PSDT

preview
1{
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5        "Tissue",
6        "Biosample",
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12    "age_units": "year",
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14        "igvf:corces_tissue_BANN0002_CING"
15    ],
16    "audit": {
17        "INTERNAL_ACTION": [
18            {
19                "category": "mismatched status",
20                "detail": "Preview tissue [IGVFSM9177PSDT](/tissues/IGVFSM9177PSDT/) has in progress subobject phenotype term [DOID_14330](/phenotype-terms/DOID_14330/).",
21                "level": 30,
22                "level_name": "INTERNAL_ACTION",
23                "name": "audit_item_status",
24                "path": "/tissues/IGVFSM9177PSDT/"
25            },
26            {
27                "category": "missing CCF ID",
28                "detail": "Tissue [IGVFSM9177PSDT](/tissues/IGVFSM9177PSDT/) is missing a `ccf_id`. Human tissues are expected to specify a common coordinate framework identifier (CCF ID).",
29                "level": 30,
30                "level_name": "INTERNAL_ACTION",
31                "name": "audit_tissue_ccf_id",
32                "path": "/tissues/IGVFSM9177PSDT/"
33            }
34        ]
35    },
36    "award": {
37        "@id": "/awards/HG012076/",
38        "component": "mapping"
39    },
40    "classifications": [
41        "tissue"
42    ],
43    "creation_timestamp": "2025-03-19T04:13:42.500583+00:00",
44    "date_obtained": "2023-02-15",
45    "disease_terms": [
46        {
47            "@id": "/phenotype-terms/MONDO_0004975/",
48            "status": "released",
49            "term_name": "Alzheimer disease"
50        },
51        {
52            "@id": "/phenotype-terms/DOID_14330/",
53            "status": "in progress",
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55        }
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57    "donors": [
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78            "preferred_assay_title": "10x multiome",
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80            "summary": "single-nucleus ATAC-seq (10x multiome)"
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131            "lab": {
132                "title": "Ryan Corces, Gladstone Institute UCSF"
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146                "title": "Ryan Corces, Gladstone Institute UCSF"
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174                "title": "Ryan Corces, Gladstone Institute UCSF"
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178            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
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188                "title": "Ryan Corces, Gladstone Institute UCSF"
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220            "summary": "single-nucleus ATAC-seq (10x multiome)"
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244                "title": "Ryan Corces, Gladstone Institute UCSF"
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248            "summary": "single-nucleus ATAC-seq (10x multiome)"
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262            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
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272                "title": "Ryan Corces, Gladstone Institute UCSF"
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298            "status": "in progress"
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301    "lab": {
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303        "title": "Ryan Corces, Gladstone Institute UCSF"
304    },
305    "lower_bound_age": 79,
306    "lower_bound_age_in_hours": 692040,
307    "multiplexed_in": [
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348    ],
349    "origin_of": [],
350    "parts": [],
351    "pmi": 180,
352    "pmi_units": "minute",
353    "pooled_in": [],
354    "preservation_method": "flash-freezing",
355    "protocols": [
356        "https://www.protocols.io/view/isolation-of-nuclei-from-frozen-tissue-for-snmulti-6uchesw"
357    ],
358    "sample_terms": [
359        {
360            "@id": "/sample-terms/UBERON_0002740/",
361            "status": "preview",
362            "term_name": "posterior cingulate gyrus"
363        }
364    ],
365    "schema_version": "21",
366    "sex": "male",
367    "sorted_fractions": [],
368    "sources": [
369        {
370            "@id": "/sources/banner-health/",
371            "status": "released",
372            "title": "Banner Health"
373        }
374    ],
375    "status": "preview",
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377        "@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
378        "title": "Ryan Corces"
379    },
380    "summary": "Homo sapiens (male, 79 years) posterior cingulate gyrus tissue associated with Alzheimer disease, Parkinson's disease",
381    "taxa": "Homo sapiens",
382    "upper_bound_age": 79,
383    "upper_bound_age_in_hours": 692040,
384    "uuid": "abbb166b-117a-4a43-9650-7725899b0eab",
385    "virtual": false
386}