{
"@context": "/terms/",
"@id": "/tissues/IGVFSM8201XPIS/",
"@type": [
"Tissue",
"Biosample",
"Sample",
"Item"
],
"accession": "IGVFSM8201XPIS",
"age": "69",
"age_units": "day",
"aliases": [
"ali-mortazavi:046_NZOJ_10F_03_NTR_0000750"
],
"audit": {
"INTERNAL_ACTION": [
{
"category": "NTR term ID",
"detail": "Sample term for [NTR_0000750](/sample-terms/NTR_0000750/) has been newly requested. Ontology terms with a newly requested term ID are expected to have it updated following its addition to the appropriate ontology database.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_ntr_term_id",
"path": "/sample-terms/NTR_0000750/"
},
{
"category": "missing publication",
"detail": "Tissue [IGVFSM8201XPIS](/tissues/IGVFSM8201XPIS/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_sample_missing_publication",
"path": "/tissues/IGVFSM8201XPIS/"
}
]
},
"award": {
"@id": "/awards/HG012077/",
"component": "mapping"
},
"classifications": [
"tissue"
],
"creation_timestamp": "2023-10-18T23:33:34.313096+00:00",
"donors": [
{
"@id": "/rodent-donors/IGVFDO3534MDFF/",
"accession": "IGVFDO3534MDFF",
"status": "released",
"strain": "NZO/H1LtJ"
}
],
"file_sets": [
{
"@id": "/measurement-sets/IGVFDS6102WMDF/",
"accession": "IGVFDS6102WMDF",
"aliases": [
"ali-mortazavi:012_13A_illumina"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ali Mortazavi, UCI"
},
"preferred_assay_title": "Parse SPLiT-seq",
"status": "released",
"summary": "Parse SPLiT-seq"
},
{
"@id": "/analysis-sets/IGVFDS4493MGSZ/",
"accession": "IGVFDS4493MGSZ",
"aliases": [
"ali-mortazavi:igvf_012_Subpool_1_total+core"
],
"file_set_type": "intermediate analysis",
"lab": {
"title": "Ali Mortazavi, UCI"
},
"status": "released",
"summary": "Parse SPLiT-seq: sparse gene count matrix"
},
{
"@id": "/analysis-sets/IGVFDS8997QHCM/",
"accession": "IGVFDS8997QHCM",
"aliases": [
"ali-mortazavi:founder_adrenal_analysis"
],
"file_set_type": "principal analysis",
"lab": {
"title": "Ali Mortazavi, UCI"
},
"status": "released",
"summary": "Parse SPLiT-seq: sparse gene count matrix"
},
{
"@id": "/analysis-sets/IGVFDS2950ZMLN/",
"accession": "IGVFDS2950ZMLN",
"aliases": [
"ali-mortazavi:founder_cortexhippocampus_analysis"
],
"file_set_type": "principal analysis",
"lab": {
"title": "Ali Mortazavi, UCI"
},
"status": "released",
"summary": "Parse SPLiT-seq: sparse gene count matrix"
},
{
"@id": "/analysis-sets/IGVFDS1666GZSV/",
"accession": "IGVFDS1666GZSV",
"aliases": [
"ali-mortazavi:founder_diencephalonpituitary_analysis"
],
"file_set_type": "principal analysis",
"lab": {
"title": "Ali Mortazavi, UCI"
},
"status": "released",
"summary": "Parse SPLiT-seq: sparse gene count matrix"
},
{
"@id": "/analysis-sets/IGVFDS9423ZPAY/",
"accession": "IGVFDS9423ZPAY",
"aliases": [
"ali-mortazavi:founder_gastrocnemius_analysis"
],
"file_set_type": "principal analysis",
"lab": {
"title": "Ali Mortazavi, UCI"
},
"status": "released",
"summary": "Parse SPLiT-seq: sparse gene count matrix"
},
{
"@id": "/analysis-sets/IGVFDS0868APKJ/",
"accession": "IGVFDS0868APKJ",
"aliases": [
"ali-mortazavi:founder_heart_analysis"
],
"file_set_type": "principal analysis",
"lab": {
"title": "Ali Mortazavi, UCI"
},
"status": "released",
"summary": "Parse SPLiT-seq: sparse gene count matrix"
},
{
"@id": "/measurement-sets/IGVFDS5512NECU/",
"accession": "IGVFDS5512NECU",
"aliases": [
"ali-mortazavi:012_13B_illumina"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ali Mortazavi, UCI"
},
"preferred_assay_title": "Parse SPLiT-seq",
"status": "released",
"summary": "Parse SPLiT-seq"
},
{
"@id": "/analysis-sets/IGVFDS0108MUVF/",
"accession": "IGVFDS0108MUVF",
"aliases": [
"ali-mortazavi:igvf_012_Subpool_2_total+core"
],
"file_set_type": "intermediate analysis",
"lab": {
"title": "Ali Mortazavi, UCI"
},
"status": "released",
"summary": "Parse SPLiT-seq: sparse gene count matrix"
},
{
"@id": "/measurement-sets/IGVFDS7630FUMT/",
"accession": "IGVFDS7630FUMT",
"aliases": [
"ali-mortazavi:012_13C_illumina"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ali Mortazavi, UCI"
},
"preferred_assay_title": "Parse SPLiT-seq",
"status": "released",
"summary": "Parse SPLiT-seq"
},
{
"@id": "/analysis-sets/IGVFDS0314XOTU/",
"accession": "IGVFDS0314XOTU",
"aliases": [
"ali-mortazavi:igvf_012_Subpool_3_total+core"
],
"file_set_type": "intermediate analysis",
"lab": {
"title": "Ali Mortazavi, UCI"
},
"status": "released",
"summary": "Parse SPLiT-seq: sparse gene count matrix"
},
{
"@id": "/measurement-sets/IGVFDS5939OGHF/",
"accession": "IGVFDS5939OGHF",
"aliases": [
"ali-mortazavi:012_13G_illumina"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ali Mortazavi, UCI"
},
"preferred_assay_title": "Parse SPLiT-seq",
"status": "released",
"summary": "Parse SPLiT-seq"
},
{
"@id": "/analysis-sets/IGVFDS5380YBJA/",
"accession": "IGVFDS5380YBJA",
"aliases": [
"ali-mortazavi:igvf_012_Subpool_7_total+core"
],
"file_set_type": "intermediate analysis",
"lab": {
"title": "Ali Mortazavi, UCI"
},
"status": "released",
"summary": "Parse SPLiT-seq: sparse gene count matrix"
},
{
"@id": "/measurement-sets/IGVFDS1381GERK/",
"accession": "IGVFDS1381GERK",
"aliases": [
"ali-mortazavi:012_13H_illumina"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ali Mortazavi, UCI"
},
"preferred_assay_title": "Parse SPLiT-seq",
"status": "released",
"summary": "Parse SPLiT-seq"
},
{
"@id": "/analysis-sets/IGVFDS2966EFNN/",
"accession": "IGVFDS2966EFNN",
"aliases": [
"ali-mortazavi:igvf_012_Subpool_8_total+core"
],
"file_set_type": "intermediate analysis",
"lab": {
"title": "Ali Mortazavi, UCI"
},
"status": "released",
"summary": "Parse SPLiT-seq: sparse gene count matrix"
},
{
"@id": "/measurement-sets/IGVFDS3302FHKC/",
"accession": "IGVFDS3302FHKC",
"aliases": [
"ali-mortazavi:012_13D_illumina"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ali Mortazavi, UCI"
},
"preferred_assay_title": "Parse SPLiT-seq",
"status": "released",
"summary": "Parse SPLiT-seq"
},
{
"@id": "/analysis-sets/IGVFDS7915RASL/",
"accession": "IGVFDS7915RASL",
"aliases": [
"ali-mortazavi:igvf_012_Subpool_4_total+core"
],
"file_set_type": "intermediate analysis",
"lab": {
"title": "Ali Mortazavi, UCI"
},
"status": "released",
"summary": "Parse SPLiT-seq: sparse gene count matrix"
},
{
"@id": "/measurement-sets/IGVFDS9962UVBO/",
"accession": "IGVFDS9962UVBO",
"aliases": [
"ali-mortazavi:012_13E_illumina"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ali Mortazavi, UCI"
},
"preferred_assay_title": "Parse SPLiT-seq",
"status": "released",
"summary": "Parse SPLiT-seq"
},
{
"@id": "/analysis-sets/IGVFDS0074LRVV/",
"accession": "IGVFDS0074LRVV",
"aliases": [
"ali-mortazavi:igvf_012_Subpool_5_total+core"
],
"file_set_type": "intermediate analysis",
"lab": {
"title": "Ali Mortazavi, UCI"
},
"status": "released",
"summary": "Parse SPLiT-seq: sparse gene count matrix"
},
{
"@id": "/measurement-sets/IGVFDS6345NYTC/",
"accession": "IGVFDS6345NYTC",
"aliases": [
"ali-mortazavi:012_13F_illumina"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ali Mortazavi, UCI"
},
"preferred_assay_title": "Parse SPLiT-seq",
"status": "released",
"summary": "Parse SPLiT-seq"
},
{
"@id": "/analysis-sets/IGVFDS2302XZWV/",
"accession": "IGVFDS2302XZWV",
"aliases": [
"ali-mortazavi:igvf_012_Subpool_6_total+core"
],
"file_set_type": "intermediate analysis",
"lab": {
"title": "Ali Mortazavi, UCI"
},
"status": "released",
"summary": "Parse SPLiT-seq: sparse gene count matrix"
}
],
"institutional_certificates": [],
"lab": {
"@id": "/labs/ali-mortazavi/",
"title": "Ali Mortazavi, UCI"
},
"lower_bound_age": 69,
"lower_bound_age_in_hours": 1656,
"multiplexed_in": [
{
"@id": "/multiplexed-samples/IGVFSM8579RFZL/",
"accession": "IGVFSM8579RFZL",
"status": "released"
},
{
"@id": "/multiplexed-samples/IGVFSM7381DIEN/",
"accession": "IGVFSM7381DIEN",
"status": "released"
},
{
"@id": "/multiplexed-samples/IGVFSM7382DPJV/",
"accession": "IGVFSM7382DPJV",
"status": "released"
},
{
"@id": "/multiplexed-samples/IGVFSM7258KMGW/",
"accession": "IGVFSM7258KMGW",
"status": "released"
},
{
"@id": "/multiplexed-samples/IGVFSM7128PWFB/",
"accession": "IGVFSM7128PWFB",
"status": "released"
},
{
"@id": "/multiplexed-samples/IGVFSM0939WGPD/",
"accession": "IGVFSM0939WGPD",
"status": "released"
},
{
"@id": "/multiplexed-samples/IGVFSM7405FLWQ/",
"accession": "IGVFSM7405FLWQ",
"status": "released"
},
{
"@id": "/multiplexed-samples/IGVFSM4235CNOB/",
"accession": "IGVFSM4235CNOB",
"status": "released"
}
],
"origin_of": [],
"parts": [],
"pooled_in": [],
"release_timestamp": "2025-04-19T01:55:33.342289+00:00",
"sample_terms": [
{
"@id": "/sample-terms/NTR_0000750/",
"status": "released",
"term_name": "left hippocampal formation"
}
],
"schema_version": "21",
"sex": "female",
"sorted_fractions": [],
"sources": [
{
"@id": "/sources/jackson-labs/",
"status": "released",
"title": "The Jackson Laboratory"
}
],
"status": "released",
"submitted_by": {
"@id": "/users/ebd1025b-e3ab-4e51-bfcd-1415f278281a/",
"title": "Diane Trout"
},
"summary": "Mus musculus NZO/H1LtJ (female, 69 days) left hippocampal formation tissue",
"taxa": "Mus musculus",
"upper_bound_age": 69,
"upper_bound_age_in_hours": 1656,
"uuid": "204cd5a3-ccfd-4103-8f93-b2da7d330414",
"virtual": false
}