ovary — IGVFSM7587IQZO

released
1{
2    "@context": "/terms/",
3    "@id": "/tissues/IGVFSM7587IQZO/",
4    "@type": [
5        "Tissue",
6        "Biosample",
7        "Sample",
8        "Item"
9    ],
10    "accession": "IGVFSM7587IQZO",
11    "age": "72",
12    "age_units": "day",
13    "aliases": [
14        "ali-mortazavi:018_B6J_10F_10_UBERON_0000992"
15    ],
16    "audit": {
17        "INTERNAL_ACTION": [
18            {
19                "category": "missing publication",
20                "detail": "Tissue [IGVFSM7587IQZO](/tissues/IGVFSM7587IQZO/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
21                "level": 30,
22                "level_name": "INTERNAL_ACTION",
23                "name": "audit_sample_missing_publication",
24                "path": "/tissues/IGVFSM7587IQZO/"
25            }
26        ]
27    },
28    "award": {
29        "@id": "/awards/HG012077/",
30        "component": "mapping"
31    },
32    "classifications": [
33        "tissue"
34    ],
35    "creation_timestamp": "2023-10-09T17:23:44.297036+00:00",
36    "donors": [
37        {
38            "@id": "/rodent-donors/IGVFDO0026YRCR/",
39            "accession": "IGVFDO0026YRCR",
40            "status": "released",
41            "strain": "C57BL/6J"
42        }
43    ],
44    "file_sets": [
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46            "@id": "/measurement-sets/IGVFDS1771HEWD/",
47            "accession": "IGVFDS1771HEWD",
48            "aliases": [
49                "ali-mortazavi:008B_67A_illumina"
50            ],
51            "file_set_type": "experimental data",
52            "lab": {
53                "title": "Ali Mortazavi, UCI"
54            },
55            "preferred_assay_title": "Parse SPLiT-seq",
56            "status": "released",
57            "summary": "Parse SPLiT-seq"
58        },
59        {
60            "@id": "/analysis-sets/IGVFDS2322SHKB/",
61            "accession": "IGVFDS2322SHKB",
62            "aliases": [
63                "ali-mortazavi:igvf_008b_Subpool_2_total+core"
64            ],
65            "file_set_type": "intermediate analysis",
66            "lab": {
67                "title": "Ali Mortazavi, UCI"
68            },
69            "status": "released",
70            "summary": "Parse SPLiT-seq: sparse gene count matrix"
71        },
72        {
73            "@id": "/analysis-sets/IGVFDS0751LIZC/",
74            "accession": "IGVFDS0751LIZC",
75            "aliases": [
76                "ali-mortazavi:founder_gonadsmale_analysis"
77            ],
78            "file_set_type": "principal analysis",
79            "lab": {
80                "title": "Ali Mortazavi, UCI"
81            },
82            "status": "released",
83            "summary": "Parse SPLiT-seq: sparse gene count matrix"
84        },
85        {
86            "@id": "/analysis-sets/IGVFDS8997QHCM/",
87            "accession": "IGVFDS8997QHCM",
88            "aliases": [
89                "ali-mortazavi:founder_adrenal_analysis"
90            ],
91            "file_set_type": "principal analysis",
92            "lab": {
93                "title": "Ali Mortazavi, UCI"
94            },
95            "status": "released",
96            "summary": "Parse SPLiT-seq: sparse gene count matrix"
97        },
98        {
99            "@id": "/analysis-sets/IGVFDS5397SEOD/",
100            "accession": "IGVFDS5397SEOD",
101            "aliases": [
102                "ali-mortazavi:founder_gonadsfemale_analysis"
103            ],
104            "file_set_type": "principal analysis",
105            "lab": {
106                "title": "Ali Mortazavi, UCI"
107            },
108            "status": "released",
109            "summary": "Parse SPLiT-seq: sparse gene count matrix"
110        },
111        {
112            "@id": "/measurement-sets/IGVFDS2542HOJK/",
113            "accession": "IGVFDS2542HOJK",
114            "aliases": [
115                "ali-mortazavi:007_67I_illumina"
116            ],
117            "file_set_type": "experimental data",
118            "lab": {
119                "title": "Ali Mortazavi, UCI"
120            },
121            "preferred_assay_title": "Parse SPLiT-seq",
122            "status": "released",
123            "summary": "Parse SPLiT-seq"
124        },
125        {
126            "@id": "/analysis-sets/IGVFDS2024ORFO/",
127            "accession": "IGVFDS2024ORFO",
128            "aliases": [
129                "ali-mortazavi:igvf_007_Subpool_10_total+core"
130            ],
131            "file_set_type": "intermediate analysis",
132            "lab": {
133                "title": "Ali Mortazavi, UCI"
134            },
135            "status": "released",
136            "summary": "Parse SPLiT-seq: sparse gene count matrix"
137        },
138        {
139            "@id": "/analysis-sets/IGVFDS1666GZSV/",
140            "accession": "IGVFDS1666GZSV",
141            "aliases": [
142                "ali-mortazavi:founder_diencephalonpituitary_analysis"
143            ],
144            "file_set_type": "principal analysis",
145            "lab": {
146                "title": "Ali Mortazavi, UCI"
147            },
148            "status": "released",
149            "summary": "Parse SPLiT-seq: sparse gene count matrix"
150        },
151        {
152            "@id": "/measurement-sets/IGVFDS7533FCII/",
153            "accession": "IGVFDS7533FCII",
154            "aliases": [
155                "ali-mortazavi:007_67A_illumina"
156            ],
157            "file_set_type": "experimental data",
158            "lab": {
159                "title": "Ali Mortazavi, UCI"
160            },
161            "preferred_assay_title": "Parse SPLiT-seq",
162            "status": "released",
163            "summary": "Parse SPLiT-seq"
164        },
165        {
166            "@id": "/analysis-sets/IGVFDS1162EVFG/",
167            "accession": "IGVFDS1162EVFG",
168            "aliases": [
169                "ali-mortazavi:igvf_007_Subpool_2_total+core"
170            ],
171            "file_set_type": "intermediate analysis",
172            "lab": {
173                "title": "Ali Mortazavi, UCI"
174            },
175            "status": "released",
176            "summary": "Parse SPLiT-seq: sparse gene count matrix"
177        },
178        {
179            "@id": "/measurement-sets/IGVFDS1044PZYO/",
180            "accession": "IGVFDS1044PZYO",
181            "aliases": [
182                "ali-mortazavi:007_67B_illumina"
183            ],
184            "file_set_type": "experimental data",
185            "lab": {
186                "title": "Ali Mortazavi, UCI"
187            },
188            "preferred_assay_title": "Parse SPLiT-seq",
189            "status": "released",
190            "summary": "Parse SPLiT-seq"
191        },
192        {
193            "@id": "/analysis-sets/IGVFDS6871VMUY/",
194            "accession": "IGVFDS6871VMUY",
195            "aliases": [
196                "ali-mortazavi:igvf_007_Subpool_3_total+core"
197            ],
198            "file_set_type": "intermediate analysis",
199            "lab": {
200                "title": "Ali Mortazavi, UCI"
201            },
202            "status": "released",
203            "summary": "Parse SPLiT-seq: sparse gene count matrix"
204        },
205        {
206            "@id": "/measurement-sets/IGVFDS2599SXCL/",
207            "accession": "IGVFDS2599SXCL",
208            "aliases": [
209                "ali-mortazavi:007_67C_illumina"
210            ],
211            "file_set_type": "experimental data",
212            "lab": {
213                "title": "Ali Mortazavi, UCI"
214            },
215            "preferred_assay_title": "Parse SPLiT-seq",
216            "status": "released",
217            "summary": "Parse SPLiT-seq"
218        },
219        {
220            "@id": "/analysis-sets/IGVFDS9651EAQD/",
221            "accession": "IGVFDS9651EAQD",
222            "aliases": [
223                "ali-mortazavi:igvf_007_Subpool_4_total+core"
224            ],
225            "file_set_type": "intermediate analysis",
226            "lab": {
227                "title": "Ali Mortazavi, UCI"
228            },
229            "status": "released",
230            "summary": "Parse SPLiT-seq: sparse gene count matrix"
231        },
232        {
233            "@id": "/measurement-sets/IGVFDS3698WBTT/",
234            "accession": "IGVFDS3698WBTT",
235            "aliases": [
236                "ali-mortazavi:007_67D_illumina"
237            ],
238            "file_set_type": "experimental data",
239            "lab": {
240                "title": "Ali Mortazavi, UCI"
241            },
242            "preferred_assay_title": "Parse SPLiT-seq",
243            "status": "released",
244            "summary": "Parse SPLiT-seq"
245        },
246        {
247            "@id": "/analysis-sets/IGVFDS8925NHBX/",
248            "accession": "IGVFDS8925NHBX",
249            "aliases": [
250                "ali-mortazavi:igvf_007_Subpool_5_total+core"
251            ],
252            "file_set_type": "intermediate analysis",
253            "lab": {
254                "title": "Ali Mortazavi, UCI"
255            },
256            "status": "released",
257            "summary": "Parse SPLiT-seq: sparse gene count matrix"
258        },
259        {
260            "@id": "/measurement-sets/IGVFDS8596SFBH/",
261            "accession": "IGVFDS8596SFBH",
262            "aliases": [
263                "ali-mortazavi:007_67E_illumina"
264            ],
265            "file_set_type": "experimental data",
266            "lab": {
267                "title": "Ali Mortazavi, UCI"
268            },
269            "preferred_assay_title": "Parse SPLiT-seq",
270            "status": "released",
271            "summary": "Parse SPLiT-seq"
272        },
273        {
274            "@id": "/analysis-sets/IGVFDS7940GLSG/",
275            "accession": "IGVFDS7940GLSG",
276            "aliases": [
277                "ali-mortazavi:igvf_007_Subpool_6_total+core"
278            ],
279            "file_set_type": "intermediate analysis",
280            "lab": {
281                "title": "Ali Mortazavi, UCI"
282            },
283            "status": "released",
284            "summary": "Parse SPLiT-seq: sparse gene count matrix"
285        },
286        {
287            "@id": "/measurement-sets/IGVFDS4560LMBT/",
288            "accession": "IGVFDS4560LMBT",
289            "aliases": [
290                "ali-mortazavi:008B_67B_illumina"
291            ],
292            "file_set_type": "experimental data",
293            "lab": {
294                "title": "Ali Mortazavi, UCI"
295            },
296            "preferred_assay_title": "Parse SPLiT-seq",
297            "status": "released",
298            "summary": "Parse SPLiT-seq"
299        },
300        {
301            "@id": "/analysis-sets/IGVFDS3222WCZH/",
302            "accession": "IGVFDS3222WCZH",
303            "aliases": [
304                "ali-mortazavi:igvf_008b_Subpool_3_total+core"
305            ],
306            "file_set_type": "intermediate analysis",
307            "lab": {
308                "title": "Ali Mortazavi, UCI"
309            },
310            "status": "released",
311            "summary": "Parse SPLiT-seq: sparse gene count matrix"
312        },
313        {
314            "@id": "/measurement-sets/IGVFDS5449NHFC/",
315            "accession": "IGVFDS5449NHFC",
316            "aliases": [
317                "ali-mortazavi:007_67F_illumina"
318            ],
319            "file_set_type": "experimental data",
320            "lab": {
321                "title": "Ali Mortazavi, UCI"
322            },
323            "preferred_assay_title": "Parse SPLiT-seq",
324            "status": "released",
325            "summary": "Parse SPLiT-seq"
326        },
327        {
328            "@id": "/analysis-sets/IGVFDS1590RRGH/",
329            "accession": "IGVFDS1590RRGH",
330            "aliases": [
331                "ali-mortazavi:igvf_007_Subpool_7_total+core"
332            ],
333            "file_set_type": "intermediate analysis",
334            "lab": {
335                "title": "Ali Mortazavi, UCI"
336            },
337            "status": "released",
338            "summary": "Parse SPLiT-seq: sparse gene count matrix"
339        },
340        {
341            "@id": "/measurement-sets/IGVFDS6939JOLI/",
342            "accession": "IGVFDS6939JOLI",
343            "aliases": [
344                "ali-mortazavi:007_67G_illumina"
345            ],
346            "file_set_type": "experimental data",
347            "lab": {
348                "title": "Ali Mortazavi, UCI"
349            },
350            "preferred_assay_title": "Parse SPLiT-seq",
351            "status": "released",
352            "summary": "Parse SPLiT-seq"
353        },
354        {
355            "@id": "/analysis-sets/IGVFDS4722UIJL/",
356            "accession": "IGVFDS4722UIJL",
357            "aliases": [
358                "ali-mortazavi:igvf_007_Subpool_8_total+core"
359            ],
360            "file_set_type": "intermediate analysis",
361            "lab": {
362                "title": "Ali Mortazavi, UCI"
363            },
364            "status": "released",
365            "summary": "Parse SPLiT-seq: sparse gene count matrix"
366        },
367        {
368            "@id": "/measurement-sets/IGVFDS3980EKXU/",
369            "accession": "IGVFDS3980EKXU",
370            "aliases": [
371                "ali-mortazavi:007_67H_illumina"
372            ],
373            "file_set_type": "experimental data",
374            "lab": {
375                "title": "Ali Mortazavi, UCI"
376            },
377            "preferred_assay_title": "Parse SPLiT-seq",
378            "status": "released",
379            "summary": "Parse SPLiT-seq"
380        },
381        {
382            "@id": "/analysis-sets/IGVFDS9185UTQU/",
383            "accession": "IGVFDS9185UTQU",
384            "aliases": [
385                "ali-mortazavi:igvf_007_Subpool_9_total+core"
386            ],
387            "file_set_type": "intermediate analysis",
388            "lab": {
389                "title": "Ali Mortazavi, UCI"
390            },
391            "status": "released",
392            "summary": "Parse SPLiT-seq: sparse gene count matrix"
393        },
394        {
395            "@id": "/measurement-sets/IGVFDS4267KGON/",
396            "accession": "IGVFDS4267KGON",
397            "aliases": [
398                "ali-mortazavi:007_67J_illumina"
399            ],
400            "file_set_type": "experimental data",
401            "lab": {
402                "title": "Ali Mortazavi, UCI"
403            },
404            "preferred_assay_title": "Parse SPLiT-seq",
405            "status": "released",
406            "summary": "Parse SPLiT-seq"
407        },
408        {
409            "@id": "/analysis-sets/IGVFDS5160RSCT/",
410            "accession": "IGVFDS5160RSCT",
411            "aliases": [
412                "ali-mortazavi:igvf_007_Subpool_11_total+core"
413            ],
414            "file_set_type": "intermediate analysis",
415            "lab": {
416                "title": "Ali Mortazavi, UCI"
417            },
418            "status": "released",
419            "summary": "Parse SPLiT-seq: sparse gene count matrix"
420        },
421        {
422            "@id": "/measurement-sets/IGVFDS3112LPSJ/",
423            "accession": "IGVFDS3112LPSJ",
424            "aliases": [
425                "ali-mortazavi:007_67K_illumina"
426            ],
427            "file_set_type": "experimental data",
428            "lab": {
429                "title": "Ali Mortazavi, UCI"
430            },
431            "preferred_assay_title": "Parse SPLiT-seq",
432            "status": "released",
433            "summary": "Parse SPLiT-seq"
434        },
435        {
436            "@id": "/analysis-sets/IGVFDS2129WTPV/",
437            "accession": "IGVFDS2129WTPV",
438            "aliases": [
439                "ali-mortazavi:igvf_007_Subpool_12_total+core"
440            ],
441            "file_set_type": "intermediate analysis",
442            "lab": {
443                "title": "Ali Mortazavi, UCI"
444            },
445            "status": "released",
446            "summary": "Parse SPLiT-seq: sparse gene count matrix"
447        },
448        {
449            "@id": "/measurement-sets/IGVFDS8310XEDQ/",
450            "accession": "IGVFDS8310XEDQ",
451            "aliases": [
452                "ali-mortazavi:007_67L_illumina"
453            ],
454            "file_set_type": "experimental data",
455            "lab": {
456                "title": "Ali Mortazavi, UCI"
457            },
458            "preferred_assay_title": "Parse SPLiT-seq",
459            "status": "released",
460            "summary": "Parse SPLiT-seq"
461        },
462        {
463            "@id": "/analysis-sets/IGVFDS1689MMMU/",
464            "accession": "IGVFDS1689MMMU",
465            "aliases": [
466                "ali-mortazavi:igvf_007_Subpool_13_total+core"
467            ],
468            "file_set_type": "intermediate analysis",
469            "lab": {
470                "title": "Ali Mortazavi, UCI"
471            },
472            "status": "released",
473            "summary": "Parse SPLiT-seq: sparse gene count matrix"
474        },
475        {
476            "@id": "/measurement-sets/IGVFDS5516XBYP/",
477            "accession": "IGVFDS5516XBYP",
478            "aliases": [
479                "ali-mortazavi:007_67M_illumina"
480            ],
481            "file_set_type": "experimental data",
482            "lab": {
483                "title": "Ali Mortazavi, UCI"
484            },
485            "preferred_assay_title": "Parse SPLiT-seq",
486            "status": "released",
487            "summary": "Parse SPLiT-seq"
488        },
489        {
490            "@id": "/analysis-sets/IGVFDS7783FQBA/",
491            "accession": "IGVFDS7783FQBA",
492            "aliases": [
493                "ali-mortazavi:igvf_007_Subpool_14_total+core"
494            ],
495            "file_set_type": "intermediate analysis",
496            "lab": {
497                "title": "Ali Mortazavi, UCI"
498            },
499            "status": "released",
500            "summary": "Parse SPLiT-seq: sparse gene count matrix"
501        },
502        {
503            "@id": "/measurement-sets/IGVFDS0635TEDS/",
504            "accession": "IGVFDS0635TEDS",
505            "aliases": [
506                "ali-mortazavi:007_67N_illumina"
507            ],
508            "file_set_type": "experimental data",
509            "lab": {
510                "title": "Ali Mortazavi, UCI"
511            },
512            "preferred_assay_title": "Parse SPLiT-seq",
513            "status": "released",
514            "summary": "Parse SPLiT-seq"
515        },
516        {
517            "@id": "/analysis-sets/IGVFDS7398HNJN/",
518            "accession": "IGVFDS7398HNJN",
519            "aliases": [
520                "ali-mortazavi:igvf_007_Subpool_15_total+core"
521            ],
522            "file_set_type": "intermediate analysis",
523            "lab": {
524                "title": "Ali Mortazavi, UCI"
525            },
526            "status": "released",
527            "summary": "Parse SPLiT-seq: sparse gene count matrix"
528        },
529        {
530            "@id": "/measurement-sets/IGVFDS8576ZOGO/",
531            "accession": "IGVFDS8576ZOGO",
532            "aliases": [
533                "ali-mortazavi:008B_67C_illumina"
534            ],
535            "file_set_type": "experimental data",
536            "lab": {
537                "title": "Ali Mortazavi, UCI"
538            },
539            "preferred_assay_title": "Parse SPLiT-seq",
540            "status": "released",
541            "summary": "Parse SPLiT-seq"
542        },
543        {
544            "@id": "/analysis-sets/IGVFDS3643LKVQ/",
545            "accession": "IGVFDS3643LKVQ",
546            "aliases": [
547                "ali-mortazavi:igvf_008b_Subpool_4_total+core"
548            ],
549            "file_set_type": "intermediate analysis",
550            "lab": {
551                "title": "Ali Mortazavi, UCI"
552            },
553            "status": "released",
554            "summary": "Parse SPLiT-seq: sparse gene count matrix"
555        },
556        {
557            "@id": "/measurement-sets/IGVFDS4482RXDU/",
558            "accession": "IGVFDS4482RXDU",
559            "aliases": [
560                "ali-mortazavi:007_67O_illumina"
561            ],
562            "file_set_type": "experimental data",
563            "lab": {
564                "title": "Ali Mortazavi, UCI"
565            },
566            "preferred_assay_title": "Parse SPLiT-seq",
567            "status": "released",
568            "summary": "Parse SPLiT-seq"
569        },
570        {
571            "@id": "/analysis-sets/IGVFDS6202OJRT/",
572            "accession": "IGVFDS6202OJRT",
573            "aliases": [
574                "ali-mortazavi:igvf_007_Subpool_16_total+core"
575            ],
576            "file_set_type": "intermediate analysis",
577            "lab": {
578                "title": "Ali Mortazavi, UCI"
579            },
580            "status": "released",
581            "summary": "Parse SPLiT-seq: sparse gene count matrix"
582        },
583        {
584            "@id": "/measurement-sets/IGVFDS2384YMIN/",
585            "accession": "IGVFDS2384YMIN",
586            "aliases": [
587                "ali-mortazavi:007_13A_illumina"
588            ],
589            "file_set_type": "experimental data",
590            "lab": {
591                "title": "Ali Mortazavi, UCI"
592            },
593            "preferred_assay_title": "Parse SPLiT-seq",
594            "status": "released",
595            "summary": "Parse SPLiT-seq"
596        },
597        {
598            "@id": "/analysis-sets/IGVFDS6053NNKP/",
599            "accession": "IGVFDS6053NNKP",
600            "aliases": [
601                "ali-mortazavi:igvf_007_Subpool_EX_total+core"
602            ],
603            "file_set_type": "intermediate analysis",
604            "lab": {
605                "title": "Ali Mortazavi, UCI"
606            },
607            "status": "released",
608            "summary": "Parse SPLiT-seq: sparse gene count matrix"
609        },
610        {
611            "@id": "/measurement-sets/IGVFDS0582VJBG/",
612            "accession": "IGVFDS0582VJBG",
613            "aliases": [
614                "ali-mortazavi:008_67A_illumina"
615            ],
616            "file_set_type": "experimental data",
617            "lab": {
618                "title": "Ali Mortazavi, UCI"
619            },
620            "preferred_assay_title": "Parse SPLiT-seq",
621            "status": "released",
622            "summary": "Parse SPLiT-seq"
623        },
624        {
625            "@id": "/analysis-sets/IGVFDS4363PYFA/",
626            "accession": "IGVFDS4363PYFA",
627            "aliases": [
628                "ali-mortazavi:igvf_008_Subpool_2_total+core"
629            ],
630            "file_set_type": "intermediate analysis",
631            "lab": {
632                "title": "Ali Mortazavi, UCI"
633            },
634            "status": "released",
635            "summary": "Parse SPLiT-seq: sparse gene count matrix"
636        },
637        {
638            "@id": "/measurement-sets/IGVFDS6826OTBD/",
639            "accession": "IGVFDS6826OTBD",
640            "aliases": [
641                "ali-mortazavi:008_67B_illumina"
642            ],
643            "file_set_type": "experimental data",
644            "lab": {
645                "title": "Ali Mortazavi, UCI"
646            },
647            "preferred_assay_title": "Parse SPLiT-seq",
648            "status": "released",
649            "summary": "Parse SPLiT-seq"
650        },
651        {
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1272    "sorted_fractions": [],
1273    "sources": [
1274        {
1275            "@id": "/sources/jackson-labs/",
1276            "status": "released",
1277            "title": "The Jackson Laboratory"
1278        }
1279    ],
1280    "status": "released",
1281    "submitted_by": {
1282        "@id": "/users/ebd1025b-e3ab-4e51-bfcd-1415f278281a/",
1283        "title": "Diane Trout"
1284    },
1285    "summary": "Mus musculus C57BL/6J (female, 72 days) ovary tissue",
1286    "taxa": "Mus musculus",
1287    "upper_bound_age": 72,
1288    "upper_bound_age_in_hours": 1728,
1289    "uuid": "e4b9e2ec-94fc-4952-8be6-af96d42e386b",
1290    "virtual": false
1291}