{
"@context": "/terms/",
"@id": "/tissues/IGVFSM7436NNVT/",
"@type": [
"Tissue",
"Biosample",
"Sample",
"Item"
],
"accession": "IGVFSM7436NNVT",
"age": "80",
"age_units": "year",
"aliases": [
"igvf:corces_tissue_BANN0138_PUT"
],
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Preview tissue [IGVFSM7436NNVT](/tissues/IGVFSM7436NNVT/) has in progress subobject phenotype term [DOID_14330](/phenotype-terms/DOID_14330/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/tissues/IGVFSM7436NNVT/"
},
{
"category": "missing CCF ID",
"detail": "Tissue [IGVFSM7436NNVT](/tissues/IGVFSM7436NNVT/) is missing a `ccf_id`. Human tissues are expected to specify a common coordinate framework identifier (CCF ID).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_tissue_ccf_id",
"path": "/tissues/IGVFSM7436NNVT/"
}
]
},
"award": {
"@id": "/awards/HG012076/",
"component": "mapping"
},
"classifications": [
"tissue"
],
"creation_timestamp": "2025-03-19T04:14:19.548311+00:00",
"date_obtained": "2023-03-07",
"disease_terms": [
{
"@id": "/phenotype-terms/DOID_14330/",
"status": "in progress",
"term_name": "Parkinson's disease"
}
],
"donors": [
{
"@id": "/human-donors/IGVFDO0966KXTA/",
"accession": "IGVFDO0966KXTA",
"ethnicities": [
"European"
],
"status": "preview"
}
],
"file_sets": [
{
"@id": "/measurement-sets/IGVFDS5800WXVK/",
"accession": "IGVFDS5800WXVK",
"aliases": [
"igvf:corces_measurementSet_X041_G5_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS2612AYOV/",
"accession": "IGVFDS2612AYOV",
"aliases": [
"igvf:corces_measurementSet_X041_G5_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS3083RFCQ/",
"accession": "IGVFDS3083RFCQ",
"aliases": [
"igvf:corces_measurementSet_X041_G1_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS1691KPWU/",
"accession": "IGVFDS1691KPWU",
"aliases": [
"igvf:corces_measurementSet_X041_G1_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS9809VXKU/",
"accession": "IGVFDS9809VXKU",
"aliases": [
"igvf:corces_measurementSet_X041_G3_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS6769MHJX/",
"accession": "IGVFDS6769MHJX",
"aliases": [
"igvf:corces_measurementSet_X041_G3_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS5236WFMM/",
"accession": "IGVFDS5236WFMM",
"aliases": [
"igvf:corces_measurementSet_X041_G2_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS8913NULI/",
"accession": "IGVFDS8913NULI",
"aliases": [
"igvf:corces_measurementSet_X041_G2_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
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"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS7843JHRO/",
"accession": "IGVFDS7843JHRO",
"aliases": [
"igvf:corces_measurementSet_X041_G4_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS7314VGYF/",
"accession": "IGVFDS7314VGYF",
"aliases": [
"igvf:corces_measurementSet_X041_G4_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS4454OQTQ/",
"accession": "IGVFDS4454OQTQ",
"aliases": [
"igvf:corces_measurementSet_X041_G7_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS3636ZYTF/",
"accession": "IGVFDS3636ZYTF",
"aliases": [
"igvf:corces_measurementSet_X041_G7_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS6077CQVA/",
"accession": "IGVFDS6077CQVA",
"aliases": [
"igvf:corces_measurementSet_X041_G6_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS5006HOVG/",
"accession": "IGVFDS5006HOVG",
"aliases": [
"igvf:corces_measurementSet_X041_G6_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS0738WMFX/",
"accession": "IGVFDS0738WMFX",
"aliases": [
"igvf:corces_measurementSet_X041_G8_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS9587VFRN/",
"accession": "IGVFDS9587VFRN",
"aliases": [
"igvf:corces_measurementSet_X041_G8_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS5614USRJ/",
"accession": "IGVFDS5614USRJ",
"aliases": [
"igvf:corces_measurementSet_RP030_G1_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS4582EMVY/",
"accession": "IGVFDS4582EMVY",
"aliases": [
"igvf:corces_measurementSet_RP030_G1_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS2886SAMH/",
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"aliases": [
"igvf:corces_measurementSet_RP030_G6_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS8773ACFL/",
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"aliases": [
"igvf:corces_measurementSet_RP030_G6_RNA"
],
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"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS4628XHJR/",
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"igvf:corces_measurementSet_RP030_G7_ATAC"
],
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"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS6737HSKU/",
"accession": "IGVFDS6737HSKU",
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"igvf:corces_measurementSet_RP030_G7_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
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"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS2943LQHU/",
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"igvf:corces_measurementSet_RP014_G3_ATAC"
],
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"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS3707VRFM/",
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"igvf:corces_measurementSet_RP014_G3_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
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"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS7788KKVV/",
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"aliases": [
"igvf:corces_measurementSet_RP014_G2_ATAC"
],
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"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS3071BBZO/",
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"igvf:corces_measurementSet_RP014_G2_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS3473OBBZ/",
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"aliases": [
"igvf:corces_measurementSet_RP014_G8_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
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"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS5184YEZB/",
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"aliases": [
"igvf:corces_measurementSet_RP014_G8_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
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"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS5508ONPS/",
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},
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},
{
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},
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},
{
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],
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"title": "Ryan Corces, Gladstone Institute UCSF"
},
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"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS6353IHVX/",
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],
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"lab": {
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},
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"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS9599ZHWG/",
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],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
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],
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},
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"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
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],
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"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
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"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS3998OHPZ/",
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"igvf:corces_measurementSet_RP014_G6_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS6041FJHB/",
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"igvf:corces_measurementSet_RP014_G7_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS2731RLBA/",
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"igvf:corces_measurementSet_RP014_G7_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
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"igvf:corces_measurementSet_RP030_G2_ATAC"
],
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"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS6557TBMR/",
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"igvf:corces_measurementSet_RP030_G2_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS0912BHEQ/",
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"igvf:corces_measurementSet_RP030_G3_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS7385KBBJ/",
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"aliases": [
"igvf:corces_measurementSet_RP030_G3_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS6656GDSH/",
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"aliases": [
"igvf:corces_measurementSet_RP030_G4_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS4767ISCA/",
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"aliases": [
"igvf:corces_measurementSet_RP030_G4_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS8187GTTC/",
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"aliases": [
"igvf:corces_measurementSet_RP030_G8_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS5164BIQZ/",
"accession": "IGVFDS5164BIQZ",
"aliases": [
"igvf:corces_measurementSet_RP030_G8_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS7419QTMU/",
"accession": "IGVFDS7419QTMU",
"aliases": [
"igvf:corces_measurementSet_RP030_G5_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS3906FOFG/",
"accession": "IGVFDS3906FOFG",
"aliases": [
"igvf:corces_measurementSet_RP030_G5_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
}
],
"institutional_certificates": [
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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],
"origin_of": [],
"parts": [],
"pmi": 450,
"pmi_units": "minute",
"pooled_in": [],
"preservation_method": "flash-freezing",
"protocols": [
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],
"sample_terms": [
{
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"status": "preview",
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}
],
"schema_version": "21",
"sex": "female",
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"sources": [
{
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}