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putamen — IGVFSM6360HDIN
putamen — IGVFSM6360HDIN
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Summary
Homo sapiens (male, 82 years) putamen tissue associated with Parkinson's disease
Sample Terms
putamen
Sex
male
Age
82 years
Post-mortem Interval
255 minutes
Preservation Method
flash-freezing
Taxa
Homo sapiens
Sources
banner-health
Date Harvested
February 13, 2023
Aliases
igvf:corces_tissue_BANN1412_PUT
Protocols
https://www.protocols.io/view/isolation-of-nuclei-from-frozen-tissue-for-snmulti-6uchesw
Attribution
Ryan Corces, Gladstone Institute UCSF
(
HG012076
—
Ansuman Satpathy
)
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO3911JQLE
igvf:corces_donor_BANN1412
male
Homo sapiens
File Sets
32 items
1
2
3
4
Accession
Summary
Aliases
Lab
IGVFDS0332EHYL
single-nucleus RNA sequencing assay (10x multiome)
igvf:corces_measurementSet_RP004_G3_RNA
Ryan Corces, Gladstone Institute UCSF
IGVFDS0356QKID
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_RP004_G5_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS0455VVOE
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_RP004_G7_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS0549PHUZ
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_RP004_G2_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS0591ZXQW
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_X036_G7_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS0749RBHU
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_X036_G6_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS1696QREL
single-nucleus RNA sequencing assay (10x multiome)
igvf:corces_measurementSet_X036_G5_RNA
Ryan Corces, Gladstone Institute UCSF
IGVFDS1818PYSX
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_X036_G4_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS1836FIIK
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_X036_G8_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS2109BZLJ
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_X036_G2_ATAC
Ryan Corces, Gladstone Institute UCSF
Multiplexed In Samples
16 items
1
2
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM0887BJSQ
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
cerebral amyloid angiopathy
,
Parkinson's disease
multiplexed sample: Homo sapiens (female, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (male, 81 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples
IGVFSM1427BZIP
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 70 years) substantia nigra tissue associated with Alzheimer disease, Parkinson's disease; Homo sapiens (male, 70 years) posterior cingulate gyrus tissue associated with Parkinson's disease, mild cognitive impairment; ... and 10 more samples
IGVFSM1516CHMP
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 70 years) substantia nigra tissue associated with Alzheimer disease, Parkinson's disease; Homo sapiens (male, 70 years) posterior cingulate gyrus tissue associated with Parkinson's disease, mild cognitive impairment; ... and 10 more samples
IGVFSM2877SEAA
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
cerebral amyloid angiopathy
,
Parkinson's disease
multiplexed sample: Homo sapiens (female, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (male, 81 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples
IGVFSM3933PDRB
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 70 years) substantia nigra tissue associated with Alzheimer disease, Parkinson's disease; Homo sapiens (male, 70 years) posterior cingulate gyrus tissue associated with Parkinson's disease, mild cognitive impairment; ... and 10 more samples
IGVFSM4264GFJZ
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
cerebral amyloid angiopathy
,
Parkinson's disease
multiplexed sample: Homo sapiens (female, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (male, 81 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples
IGVFSM5141FLXJ
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 70 years) substantia nigra tissue associated with Alzheimer disease, Parkinson's disease; Homo sapiens (male, 70 years) posterior cingulate gyrus tissue associated with Parkinson's disease, mild cognitive impairment; ... and 10 more samples
IGVFSM5231ZGKX
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
cerebral amyloid angiopathy
,
Parkinson's disease
multiplexed sample: Homo sapiens (female, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (male, 81 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples
IGVFSM5358MDTC
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 70 years) substantia nigra tissue associated with Alzheimer disease, Parkinson's disease; Homo sapiens (male, 70 years) posterior cingulate gyrus tissue associated with Parkinson's disease, mild cognitive impairment; ... and 10 more samples
IGVFSM5388VXZF
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
cerebral amyloid angiopathy
,
Parkinson's disease
multiplexed sample: Homo sapiens (female, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (male, 81 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples