substantia nigra — IGVFSM6142SQIO

preview
1{
2    "@context": "/terms/",
3    "@id": "/tissues/IGVFSM6142SQIO/",
4    "@type": [
5        "Tissue",
6        "Biosample",
7        "Sample",
8        "Item"
9    ],
10    "accession": "IGVFSM6142SQIO",
11    "age": "80",
12    "age_units": "year",
13    "aliases": [
14        "igvf:corces_tissue_BANN0129_SN"
15    ],
16    "audit": {
17        "INTERNAL_ACTION": [
18            {
19                "category": "mismatched status",
20                "detail": "Preview tissue [IGVFSM6142SQIO](/tissues/IGVFSM6142SQIO/) has in progress subobject phenotype term [DOID_9246](/phenotype-terms/DOID_9246/).",
21                "level": 30,
22                "level_name": "INTERNAL_ACTION",
23                "name": "audit_item_status",
24                "path": "/tissues/IGVFSM6142SQIO/"
25            },
26            {
27                "category": "mismatched status",
28                "detail": "Preview tissue [IGVFSM6142SQIO](/tissues/IGVFSM6142SQIO/) has in progress subobject phenotype term [DOID_14330](/phenotype-terms/DOID_14330/).",
29                "level": 30,
30                "level_name": "INTERNAL_ACTION",
31                "name": "audit_item_status",
32                "path": "/tissues/IGVFSM6142SQIO/"
33            },
34            {
35                "category": "missing CCF ID",
36                "detail": "Tissue [IGVFSM6142SQIO](/tissues/IGVFSM6142SQIO/) is missing a `ccf_id`. Human tissues are expected to specify a common coordinate framework identifier (CCF ID).",
37                "level": 30,
38                "level_name": "INTERNAL_ACTION",
39                "name": "audit_tissue_ccf_id",
40                "path": "/tissues/IGVFSM6142SQIO/"
41            }
42        ]
43    },
44    "award": {
45        "@id": "/awards/HG012076/",
46        "component": "mapping"
47    },
48    "classifications": [
49        "tissue"
50    ],
51    "creation_timestamp": "2025-03-19T04:11:15.759976+00:00",
52    "date_obtained": "2022-12-14",
53    "disease_terms": [
54        {
55            "@id": "/phenotype-terms/MONDO_0004975/",
56            "status": "released",
57            "term_name": "Alzheimer disease"
58        },
59        {
60            "@id": "/phenotype-terms/DOID_14330/",
61            "status": "in progress",
62            "term_name": "Parkinson's disease"
63        },
64        {
65            "@id": "/phenotype-terms/DOID_9246/",
66            "status": "in progress",
67            "term_name": "cerebral amyloid angiopathy"
68        }
69    ],
70    "donors": [
71        {
72            "@id": "/human-donors/IGVFDO4191KJBR/",
73            "accession": "IGVFDO4191KJBR",
74            "ethnicities": [
75                "European"
76            ],
77            "status": "preview"
78        }
79    ],
80    "file_sets": [
81        {
82            "@id": "/measurement-sets/IGVFDS3166POHS/",
83            "accession": "IGVFDS3166POHS",
84            "aliases": [
85                "igvf:corces_measurementSet_X025_G2_ATAC"
86            ],
87            "file_set_type": "experimental data",
88            "lab": {
89                "title": "Ryan Corces, Gladstone Institute UCSF"
90            },
91            "preferred_assay_title": "10x multiome",
92            "status": "preview",
93            "summary": "single-nucleus ATAC-seq (10x multiome)"
94        },
95        {
96            "@id": "/measurement-sets/IGVFDS8616NAOI/",
97            "accession": "IGVFDS8616NAOI",
98            "aliases": [
99                "igvf:corces_measurementSet_X025_G2_RNA"
100            ],
101            "file_set_type": "experimental data",
102            "lab": {
103                "title": "Ryan Corces, Gladstone Institute UCSF"
104            },
105            "preferred_assay_title": "10x multiome",
106            "status": "preview",
107            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
108        },
109        {
110            "@id": "/measurement-sets/IGVFDS0326OLER/",
111            "accession": "IGVFDS0326OLER",
112            "aliases": [
113                "igvf:corces_measurementSet_X025_G4_ATAC"
114            ],
115            "file_set_type": "experimental data",
116            "lab": {
117                "title": "Ryan Corces, Gladstone Institute UCSF"
118            },
119            "preferred_assay_title": "10x multiome",
120            "status": "preview",
121            "summary": "single-nucleus ATAC-seq (10x multiome)"
122        },
123        {
124            "@id": "/measurement-sets/IGVFDS5286SAVD/",
125            "accession": "IGVFDS5286SAVD",
126            "aliases": [
127                "igvf:corces_measurementSet_X025_G4_RNA"
128            ],
129            "file_set_type": "experimental data",
130            "lab": {
131                "title": "Ryan Corces, Gladstone Institute UCSF"
132            },
133            "preferred_assay_title": "10x multiome",
134            "status": "preview",
135            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
136        },
137        {
138            "@id": "/measurement-sets/IGVFDS0241TXPM/",
139            "accession": "IGVFDS0241TXPM",
140            "aliases": [
141                "igvf:corces_measurementSet_X025_G7_RNA"
142            ],
143            "file_set_type": "experimental data",
144            "lab": {
145                "title": "Ryan Corces, Gladstone Institute UCSF"
146            },
147            "preferred_assay_title": "10x multiome",
148            "status": "preview",
149            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
150        },
151        {
152            "@id": "/measurement-sets/IGVFDS5478XCHL/",
153            "accession": "IGVFDS5478XCHL",
154            "aliases": [
155                "igvf:corces_measurementSet_X025_G7_ATAC"
156            ],
157            "file_set_type": "experimental data",
158            "lab": {
159                "title": "Ryan Corces, Gladstone Institute UCSF"
160            },
161            "preferred_assay_title": "10x multiome",
162            "status": "preview",
163            "summary": "single-nucleus ATAC-seq (10x multiome)"
164        },
165        {
166            "@id": "/measurement-sets/IGVFDS7226QHGC/",
167            "accession": "IGVFDS7226QHGC",
168            "aliases": [
169                "igvf:corces_measurementSet_X025_G6_ATAC"
170            ],
171            "file_set_type": "experimental data",
172            "lab": {
173                "title": "Ryan Corces, Gladstone Institute UCSF"
174            },
175            "preferred_assay_title": "10x multiome",
176            "status": "preview",
177            "summary": "single-nucleus ATAC-seq (10x multiome)"
178        },
179        {
180            "@id": "/measurement-sets/IGVFDS9683XLIM/",
181            "accession": "IGVFDS9683XLIM",
182            "aliases": [
183                "igvf:corces_measurementSet_X025_G6_RNA"
184            ],
185            "file_set_type": "experimental data",
186            "lab": {
187                "title": "Ryan Corces, Gladstone Institute UCSF"
188            },
189            "preferred_assay_title": "10x multiome",
190            "status": "preview",
191            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
192        },
193        {
194            "@id": "/measurement-sets/IGVFDS5235WVGK/",
195            "accession": "IGVFDS5235WVGK",
196            "aliases": [
197                "igvf:corces_measurementSet_RP004_G8_ATAC"
198            ],
199            "file_set_type": "experimental data",
200            "lab": {
201                "title": "Ryan Corces, Gladstone Institute UCSF"
202            },
203            "preferred_assay_title": "10x multiome",
204            "status": "preview",
205            "summary": "single-nucleus ATAC-seq (10x multiome)"
206        },
207        {
208            "@id": "/measurement-sets/IGVFDS6968NEVU/",
209            "accession": "IGVFDS6968NEVU",
210            "aliases": [
211                "igvf:corces_measurementSet_RP004_G8_RNA"
212            ],
213            "file_set_type": "experimental data",
214            "lab": {
215                "title": "Ryan Corces, Gladstone Institute UCSF"
216            },
217            "preferred_assay_title": "10x multiome",
218            "status": "preview",
219            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
220        },
221        {
222            "@id": "/measurement-sets/IGVFDS8438UHSY/",
223            "accession": "IGVFDS8438UHSY",
224            "aliases": [
225                "igvf:corces_measurementSet_X025_G3_ATAC"
226            ],
227            "file_set_type": "experimental data",
228            "lab": {
229                "title": "Ryan Corces, Gladstone Institute UCSF"
230            },
231            "preferred_assay_title": "10x multiome",
232            "status": "preview",
233            "summary": "single-nucleus ATAC-seq (10x multiome)"
234        },
235        {
236            "@id": "/measurement-sets/IGVFDS3087IDPH/",
237            "accession": "IGVFDS3087IDPH",
238            "aliases": [
239                "igvf:corces_measurementSet_X025_G3_RNA"
240            ],
241            "file_set_type": "experimental data",
242            "lab": {
243                "title": "Ryan Corces, Gladstone Institute UCSF"
244            },
245            "preferred_assay_title": "10x multiome",
246            "status": "preview",
247            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
248        },
249        {
250            "@id": "/measurement-sets/IGVFDS3593RLPT/",
251            "accession": "IGVFDS3593RLPT",
252            "aliases": [
253                "igvf:corces_measurementSet_X025_G1_ATAC"
254            ],
255            "file_set_type": "experimental data",
256            "lab": {
257                "title": "Ryan Corces, Gladstone Institute UCSF"
258            },
259            "preferred_assay_title": "10x multiome",
260            "status": "preview",
261            "summary": "single-nucleus ATAC-seq (10x multiome)"
262        },
263        {
264            "@id": "/measurement-sets/IGVFDS2587POGO/",
265            "accession": "IGVFDS2587POGO",
266            "aliases": [
267                "igvf:corces_measurementSet_X025_G1_RNA"
268            ],
269            "file_set_type": "experimental data",
270            "lab": {
271                "title": "Ryan Corces, Gladstone Institute UCSF"
272            },
273            "preferred_assay_title": "10x multiome",
274            "status": "preview",
275            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
276        },
277        {
278            "@id": "/measurement-sets/IGVFDS2414ATDI/",
279            "accession": "IGVFDS2414ATDI",
280            "aliases": [
281                "igvf:corces_measurementSet_X025_G5_ATAC"
282            ],
283            "file_set_type": "experimental data",
284            "lab": {
285                "title": "Ryan Corces, Gladstone Institute UCSF"
286            },
287            "preferred_assay_title": "10x multiome",
288            "status": "preview",
289            "summary": "single-nucleus ATAC-seq (10x multiome)"
290        },
291        {
292            "@id": "/measurement-sets/IGVFDS7951HUGR/",
293            "accession": "IGVFDS7951HUGR",
294            "aliases": [
295                "igvf:corces_measurementSet_X025_G5_RNA"
296            ],
297            "file_set_type": "experimental data",
298            "lab": {
299                "title": "Ryan Corces, Gladstone Institute UCSF"
300            },
301            "preferred_assay_title": "10x multiome",
302            "status": "preview",
303            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
304        },
305        {
306            "@id": "/measurement-sets/IGVFDS0356QKID/",
307            "accession": "IGVFDS0356QKID",
308            "aliases": [
309                "igvf:corces_measurementSet_RP004_G5_ATAC"
310            ],
311            "file_set_type": "experimental data",
312            "lab": {
313                "title": "Ryan Corces, Gladstone Institute UCSF"
314            },
315            "preferred_assay_title": "10x multiome",
316            "status": "preview",
317            "summary": "single-nucleus ATAC-seq (10x multiome)"
318        },
319        {
320            "@id": "/measurement-sets/IGVFDS9072MPPD/",
321            "accession": "IGVFDS9072MPPD",
322            "aliases": [
323                "igvf:corces_measurementSet_RP004_G5_RNA"
324            ],
325            "file_set_type": "experimental data",
326            "lab": {
327                "title": "Ryan Corces, Gladstone Institute UCSF"
328            },
329            "preferred_assay_title": "10x multiome",
330            "status": "preview",
331            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
332        },
333        {
334            "@id": "/measurement-sets/IGVFDS7451ZVNG/",
335            "accession": "IGVFDS7451ZVNG",
336            "aliases": [
337                "igvf:corces_measurementSet_RP004_G6_ATAC"
338            ],
339            "file_set_type": "experimental data",
340            "lab": {
341                "title": "Ryan Corces, Gladstone Institute UCSF"
342            },
343            "preferred_assay_title": "10x multiome",
344            "status": "preview",
345            "summary": "single-nucleus ATAC-seq (10x multiome)"
346        },
347        {
348            "@id": "/measurement-sets/IGVFDS3523VMTT/",
349            "accession": "IGVFDS3523VMTT",
350            "aliases": [
351                "igvf:corces_measurementSet_RP004_G6_RNA"
352            ],
353            "file_set_type": "experimental data",
354            "lab": {
355                "title": "Ryan Corces, Gladstone Institute UCSF"
356            },
357            "preferred_assay_title": "10x multiome",
358            "status": "preview",
359            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
360        },
361        {
362            "@id": "/measurement-sets/IGVFDS2479YVKW/",
363            "accession": "IGVFDS2479YVKW",
364            "aliases": [
365                "igvf:corces_measurementSet_RP026_G7_ATAC"
366            ],
367            "file_set_type": "experimental data",
368            "lab": {
369                "title": "Ryan Corces, Gladstone Institute UCSF"
370            },
371            "preferred_assay_title": "10x multiome",
372            "status": "preview",
373            "summary": "single-nucleus ATAC-seq (10x multiome)"
374        },
375        {
376            "@id": "/measurement-sets/IGVFDS5365DMUS/",
377            "accession": "IGVFDS5365DMUS",
378            "aliases": [
379                "igvf:corces_measurementSet_RP026_G7_RNA"
380            ],
381            "file_set_type": "experimental data",
382            "lab": {
383                "title": "Ryan Corces, Gladstone Institute UCSF"
384            },
385            "preferred_assay_title": "10x multiome",
386            "status": "preview",
387            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
388        },
389        {
390            "@id": "/measurement-sets/IGVFDS8426LZVO/",
391            "accession": "IGVFDS8426LZVO",
392            "aliases": [
393                "igvf:corces_measurementSet_RP004_G1_ATAC"
394            ],
395            "file_set_type": "experimental data",
396            "lab": {
397                "title": "Ryan Corces, Gladstone Institute UCSF"
398            },
399            "preferred_assay_title": "10x multiome",
400            "status": "preview",
401            "summary": "single-nucleus ATAC-seq (10x multiome)"
402        },
403        {
404            "@id": "/measurement-sets/IGVFDS8995MLTF/",
405            "accession": "IGVFDS8995MLTF",
406            "aliases": [
407                "igvf:corces_measurementSet_RP004_G1_RNA"
408            ],
409            "file_set_type": "experimental data",
410            "lab": {
411                "title": "Ryan Corces, Gladstone Institute UCSF"
412            },
413            "preferred_assay_title": "10x multiome",
414            "status": "preview",
415            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
416        },
417        {
418            "@id": "/measurement-sets/IGVFDS7782SATY/",
419            "accession": "IGVFDS7782SATY",
420            "aliases": [
421                "igvf:corces_measurementSet_RP004_G4_ATAC"
422            ],
423            "file_set_type": "experimental data",
424            "lab": {
425                "title": "Ryan Corces, Gladstone Institute UCSF"
426            },
427            "preferred_assay_title": "10x multiome",
428            "status": "preview",
429            "summary": "single-nucleus ATAC-seq (10x multiome)"
430        },
431        {
432            "@id": "/measurement-sets/IGVFDS6700ZMGV/",
433            "accession": "IGVFDS6700ZMGV",
434            "aliases": [
435                "igvf:corces_measurementSet_RP004_G4_RNA"
436            ],
437            "file_set_type": "experimental data",
438            "lab": {
439                "title": "Ryan Corces, Gladstone Institute UCSF"
440            },
441            "preferred_assay_title": "10x multiome",
442            "status": "preview",
443            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
444        },
445        {
446            "@id": "/measurement-sets/IGVFDS0549PHUZ/",
447            "accession": "IGVFDS0549PHUZ",
448            "aliases": [
449                "igvf:corces_measurementSet_RP004_G2_ATAC"
450            ],
451            "file_set_type": "experimental data",
452            "lab": {
453                "title": "Ryan Corces, Gladstone Institute UCSF"
454            },
455            "preferred_assay_title": "10x multiome",
456            "status": "preview",
457            "summary": "single-nucleus ATAC-seq (10x multiome)"
458        },
459        {
460            "@id": "/measurement-sets/IGVFDS9604EHJY/",
461            "accession": "IGVFDS9604EHJY",
462            "aliases": [
463                "igvf:corces_measurementSet_RP004_G2_RNA"
464            ],
465            "file_set_type": "experimental data",
466            "lab": {
467                "title": "Ryan Corces, Gladstone Institute UCSF"
468            },
469            "preferred_assay_title": "10x multiome",
470            "status": "preview",
471            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
472        },
473        {
474            "@id": "/measurement-sets/IGVFDS3710XUSS/",
475            "accession": "IGVFDS3710XUSS",
476            "aliases": [
477                "igvf:corces_measurementSet_RP004_G3_ATAC"
478            ],
479            "file_set_type": "experimental data",
480            "lab": {
481                "title": "Ryan Corces, Gladstone Institute UCSF"
482            },
483            "preferred_assay_title": "10x multiome",
484            "status": "preview",
485            "summary": "single-nucleus ATAC-seq (10x multiome)"
486        },
487        {
488            "@id": "/measurement-sets/IGVFDS0332EHYL/",
489            "accession": "IGVFDS0332EHYL",
490            "aliases": [
491                "igvf:corces_measurementSet_RP004_G3_RNA"
492            ],
493            "file_set_type": "experimental data",
494            "lab": {
495                "title": "Ryan Corces, Gladstone Institute UCSF"
496            },
497            "preferred_assay_title": "10x multiome",
498            "status": "preview",
499            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
500        },
501        {
502            "@id": "/measurement-sets/IGVFDS0455VVOE/",
503            "accession": "IGVFDS0455VVOE",
504            "aliases": [
505                "igvf:corces_measurementSet_RP004_G7_ATAC"
506            ],
507            "file_set_type": "experimental data",
508            "lab": {
509                "title": "Ryan Corces, Gladstone Institute UCSF"
510            },
511            "preferred_assay_title": "10x multiome",
512            "status": "preview",
513            "summary": "single-nucleus ATAC-seq (10x multiome)"
514        },
515        {
516            "@id": "/measurement-sets/IGVFDS2877JGNS/",
517            "accession": "IGVFDS2877JGNS",
518            "aliases": [
519                "igvf:corces_measurementSet_RP004_G7_RNA"
520            ],
521            "file_set_type": "experimental data",
522            "lab": {
523                "title": "Ryan Corces, Gladstone Institute UCSF"
524            },
525            "preferred_assay_title": "10x multiome",
526            "status": "preview",
527            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
528        },
529        {
530            "@id": "/measurement-sets/IGVFDS6846AEHO/",
531            "accession": "IGVFDS6846AEHO",
532            "aliases": [
533                "igvf:corces_measurementSet_RP026_G6_ATAC"
534            ],
535            "file_set_type": "experimental data",
536            "lab": {
537                "title": "Ryan Corces, Gladstone Institute UCSF"
538            },
539            "preferred_assay_title": "10x multiome",
540            "status": "preview",
541            "summary": "single-nucleus ATAC-seq (10x multiome)"
542        },
543        {
544            "@id": "/measurement-sets/IGVFDS1905QFFH/",
545            "accession": "IGVFDS1905QFFH",
546            "aliases": [
547                "igvf:corces_measurementSet_RP026_G6_RNA"
548            ],
549            "file_set_type": "experimental data",
550            "lab": {
551                "title": "Ryan Corces, Gladstone Institute UCSF"
552            },
553            "preferred_assay_title": "10x multiome",
554            "status": "preview",
555            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
556        },
557        {
558            "@id": "/measurement-sets/IGVFDS2952XLAO/",
559            "accession": "IGVFDS2952XLAO",
560            "aliases": [
561                "igvf:corces_measurementSet_RP026_G2_ATAC"
562            ],
563            "file_set_type": "experimental data",
564            "lab": {
565                "title": "Ryan Corces, Gladstone Institute UCSF"
566            },
567            "preferred_assay_title": "10x multiome",
568            "status": "preview",
569            "summary": "single-nucleus ATAC-seq (10x multiome)"
570        },
571        {
572            "@id": "/measurement-sets/IGVFDS7496YSSL/",
573            "accession": "IGVFDS7496YSSL",
574            "aliases": [
575                "igvf:corces_measurementSet_RP026_G2_RNA"
576            ],
577            "file_set_type": "experimental data",
578            "lab": {
579                "title": "Ryan Corces, Gladstone Institute UCSF"
580            },
581            "preferred_assay_title": "10x multiome",
582            "status": "preview",
583            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
584        },
585        {
586            "@id": "/measurement-sets/IGVFDS5780VURI/",
587            "accession": "IGVFDS5780VURI",
588            "aliases": [
589                "igvf:corces_measurementSet_RP026_G3_ATAC"
590            ],
591            "file_set_type": "experimental data",
592            "lab": {
593                "title": "Ryan Corces, Gladstone Institute UCSF"
594            },
595            "preferred_assay_title": "10x multiome",
596            "status": "preview",
597            "summary": "single-nucleus ATAC-seq (10x multiome)"
598        },
599        {
600            "@id": "/measurement-sets/IGVFDS7075IDRS/",
601            "accession": "IGVFDS7075IDRS",
602            "aliases": [
603                "igvf:corces_measurementSet_RP026_G3_RNA"
604            ],
605            "file_set_type": "experimental data",
606            "lab": {
607                "title": "Ryan Corces, Gladstone Institute UCSF"
608            },
609            "preferred_assay_title": "10x multiome",
610            "status": "preview",
611            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
612        },
613        {
614            "@id": "/measurement-sets/IGVFDS8256XMDW/",
615            "accession": "IGVFDS8256XMDW",
616            "aliases": [
617                "igvf:corces_measurementSet_RP026_G5_ATAC"
618            ],
619            "file_set_type": "experimental data",
620            "lab": {
621                "title": "Ryan Corces, Gladstone Institute UCSF"
622            },
623            "preferred_assay_title": "10x multiome",
624            "status": "preview",
625            "summary": "single-nucleus ATAC-seq (10x multiome)"
626        },
627        {
628            "@id": "/measurement-sets/IGVFDS5084HGGY/",
629            "accession": "IGVFDS5084HGGY",
630            "aliases": [
631                "igvf:corces_measurementSet_RP026_G5_RNA"
632            ],
633            "file_set_type": "experimental data",
634            "lab": {
635                "title": "Ryan Corces, Gladstone Institute UCSF"
636            },
637            "preferred_assay_title": "10x multiome",
638            "status": "preview",
639            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
640        },
641        {
642            "@id": "/measurement-sets/IGVFDS0577OKVB/",
643            "accession": "IGVFDS0577OKVB",
644            "aliases": [
645                "igvf:corces_measurementSet_RP026_G1_ATAC"
646            ],
647            "file_set_type": "experimental data",
648            "lab": {
649                "title": "Ryan Corces, Gladstone Institute UCSF"
650            },
651            "preferred_assay_title": "10x multiome",
652            "status": "preview",
653            "summary": "single-nucleus ATAC-seq (10x multiome)"
654        },
655        {
656            "@id": "/measurement-sets/IGVFDS0821GFDR/",
657            "accession": "IGVFDS0821GFDR",
658            "aliases": [
659                "igvf:corces_measurementSet_RP026_G1_RNA"
660            ],
661            "file_set_type": "experimental data",
662            "lab": {
663                "title": "Ryan Corces, Gladstone Institute UCSF"
664            },
665            "preferred_assay_title": "10x multiome",
666            "status": "preview",
667            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
668        },
669        {
670            "@id": "/measurement-sets/IGVFDS5927HVQQ/",
671            "accession": "IGVFDS5927HVQQ",
672            "aliases": [
673                "igvf:corces_measurementSet_RP026_G4_ATAC"
674            ],
675            "file_set_type": "experimental data",
676            "lab": {
677                "title": "Ryan Corces, Gladstone Institute UCSF"
678            },
679            "preferred_assay_title": "10x multiome",
680            "status": "preview",
681            "summary": "single-nucleus ATAC-seq (10x multiome)"
682        },
683        {
684            "@id": "/measurement-sets/IGVFDS6570CCTQ/",
685            "accession": "IGVFDS6570CCTQ",
686            "aliases": [
687                "igvf:corces_measurementSet_RP026_G4_RNA"
688            ],
689            "file_set_type": "experimental data",
690            "lab": {
691                "title": "Ryan Corces, Gladstone Institute UCSF"
692            },
693            "preferred_assay_title": "10x multiome",
694            "status": "preview",
695            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
696        },
697        {
698            "@id": "/measurement-sets/IGVFDS7070YJKH/",
699            "accession": "IGVFDS7070YJKH",
700            "aliases": [
701                "igvf:corces_measurementSet_RP026_G8_ATAC"
702            ],
703            "file_set_type": "experimental data",
704            "lab": {
705                "title": "Ryan Corces, Gladstone Institute UCSF"
706            },
707            "preferred_assay_title": "10x multiome",
708            "status": "preview",
709            "summary": "single-nucleus ATAC-seq (10x multiome)"
710        },
711        {
712            "@id": "/measurement-sets/IGVFDS9706KRLB/",
713            "accession": "IGVFDS9706KRLB",
714            "aliases": [
715                "igvf:corces_measurementSet_RP026_G8_RNA"
716            ],
717            "file_set_type": "experimental data",
718            "lab": {
719                "title": "Ryan Corces, Gladstone Institute UCSF"
720            },
721            "preferred_assay_title": "10x multiome",
722            "status": "preview",
723            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
724        }
725    ],
726    "institutional_certificates": [
727        {
728            "@id": "/institutional-certificates/f7742e0d-bba4-4ca3-ab80-71c7364f24e7/",
729            "certificate_identifier": "IP115-05",
730            "controlled_access": false,
731            "data_use_limitation_summary": "No limitations",
732            "status": "in progress"
733        }
734    ],
735    "lab": {
736        "@id": "/labs/ryan-corces/",
737        "title": "Ryan Corces, Gladstone Institute UCSF"
738    },
739    "lower_bound_age": 80,
740    "lower_bound_age_in_hours": 700800,
741    "multiplexed_in": [
742        {
743            "@id": "/multiplexed-samples/IGVFSM2452FKKK/",
744            "accession": "IGVFSM2452FKKK",
745            "status": "preview"
746        },
747        {
748            "@id": "/multiplexed-samples/IGVFSM5024AIVR/",
749            "accession": "IGVFSM5024AIVR",
750            "status": "preview"
751        },
752        {
753            "@id": "/multiplexed-samples/IGVFSM6749LEWH/",
754            "accession": "IGVFSM6749LEWH",
755            "status": "preview"
756        },
757        {
758            "@id": "/multiplexed-samples/IGVFSM6541UOZS/",
759            "accession": "IGVFSM6541UOZS",
760            "status": "preview"
761        },
762        {
763            "@id": "/multiplexed-samples/IGVFSM3933PDRB/",
764            "accession": "IGVFSM3933PDRB",
765            "status": "preview"
766        },
767        {
768            "@id": "/multiplexed-samples/IGVFSM5411LEQJ/",
769            "accession": "IGVFSM5411LEQJ",
770            "status": "preview"
771        },
772        {
773            "@id": "/multiplexed-samples/IGVFSM7687WPSD/",
774            "accession": "IGVFSM7687WPSD",
775            "status": "in progress"
776        },
777        {
778            "@id": "/multiplexed-samples/IGVFSM6254TPHT/",
779            "accession": "IGVFSM6254TPHT",
780            "status": "preview"
781        },
782        {
783            "@id": "/multiplexed-samples/IGVFSM7611BPOR/",
784            "accession": "IGVFSM7611BPOR",
785            "status": "preview"
786        },
787        {
788            "@id": "/multiplexed-samples/IGVFSM1516CHMP/",
789            "accession": "IGVFSM1516CHMP",
790            "status": "preview"
791        },
792        {
793            "@id": "/multiplexed-samples/IGVFSM9792MUYY/",
794            "accession": "IGVFSM9792MUYY",
795            "status": "preview"
796        },
797        {
798            "@id": "/multiplexed-samples/IGVFSM6899HSQU/",
799            "accession": "IGVFSM6899HSQU",
800            "status": "preview"
801        },
802        {
803            "@id": "/multiplexed-samples/IGVFSM5141FLXJ/",
804            "accession": "IGVFSM5141FLXJ",
805            "status": "preview"
806        },
807        {
808            "@id": "/multiplexed-samples/IGVFSM5502KZTB/",
809            "accession": "IGVFSM5502KZTB",
810            "status": "preview"
811        },
812        {
813            "@id": "/multiplexed-samples/IGVFSM9557IMSU/",
814            "accession": "IGVFSM9557IMSU",
815            "status": "preview"
816        },
817        {
818            "@id": "/multiplexed-samples/IGVFSM5358MDTC/",
819            "accession": "IGVFSM5358MDTC",
820            "status": "preview"
821        },
822        {
823            "@id": "/multiplexed-samples/IGVFSM1427BZIP/",
824            "accession": "IGVFSM1427BZIP",
825            "status": "preview"
826        },
827        {
828            "@id": "/multiplexed-samples/IGVFSM5241MOXO/",
829            "accession": "IGVFSM5241MOXO",
830            "status": "preview"
831        },
832        {
833            "@id": "/multiplexed-samples/IGVFSM9641MJVP/",
834            "accession": "IGVFSM9641MJVP",
835            "status": "preview"
836        },
837        {
838            "@id": "/multiplexed-samples/IGVFSM8010OCED/",
839            "accession": "IGVFSM8010OCED",
840            "status": "preview"
841        },
842        {
843            "@id": "/multiplexed-samples/IGVFSM9967FNUH/",
844            "accession": "IGVFSM9967FNUH",
845            "status": "preview"
846        },
847        {
848            "@id": "/multiplexed-samples/IGVFSM0921NWYJ/",
849            "accession": "IGVFSM0921NWYJ",
850            "status": "preview"
851        },
852        {
853            "@id": "/multiplexed-samples/IGVFSM1367EGUO/",
854            "accession": "IGVFSM1367EGUO",
855            "status": "preview"
856        },
857        {
858            "@id": "/multiplexed-samples/IGVFSM2979ZZFZ/",
859            "accession": "IGVFSM2979ZZFZ",
860            "status": "preview"
861        }
862    ],
863    "origin_of": [],
864    "parts": [],
865    "pmi": 200,
866    "pmi_units": "minute",
867    "pooled_in": [],
868    "preservation_method": "flash-freezing",
869    "protocols": [
870        "https://www.protocols.io/view/isolation-of-nuclei-from-frozen-tissue-for-snmulti-6uchesw"
871    ],
872    "sample_terms": [
873        {
874            "@id": "/sample-terms/UBERON_0002038/",
875            "status": "preview",
876            "term_name": "substantia nigra"
877        }
878    ],
879    "schema_version": "21",
880    "sex": "male",
881    "sorted_fractions": [],
882    "sources": [
883        {
884            "@id": "/sources/banner-health/",
885            "status": "released",
886            "title": "Banner Health"
887        }
888    ],
889    "status": "preview",
890    "submitted_by": {
891        "@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
892        "title": "Ryan Corces"
893    },
894    "summary": "Homo sapiens (male, 80 years) substantia nigra tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy",
895    "taxa": "Homo sapiens",
896    "upper_bound_age": 80,
897    "upper_bound_age_in_hours": 700800,
898    "uuid": "b1d81b53-10ae-4359-a584-d284d7aa0c3b",
899    "virtual": false
900}