{
"@context": "/terms/",
"@id": "/tissues/IGVFSM5179OXJV/",
"@type": [
"Tissue",
"Biosample",
"Sample",
"Item"
],
"accession": "IGVFSM5179OXJV",
"age": "79",
"age_units": "year",
"aliases": [
"igvf:corces_tissue_BANN1632_MTG_B2"
],
"audit": {
"INTERNAL_ACTION": [
{
"category": "missing CCF ID",
"detail": "Tissue [IGVFSM5179OXJV](/tissues/IGVFSM5179OXJV/) is missing a `ccf_id`. Human tissues are expected to specify a common coordinate framework identifier (CCF ID).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_tissue_ccf_id",
"path": "/tissues/IGVFSM5179OXJV/"
}
]
},
"award": {
"@id": "/awards/HG012076/",
"component": "mapping"
},
"classifications": [
"tissue"
],
"creation_timestamp": "2025-03-19T12:59:59.354175+00:00",
"date_obtained": "2023-08-21",
"donors": [
{
"@id": "/human-donors/IGVFDO5205IAEO/",
"accession": "IGVFDO5205IAEO",
"ethnicities": [
"European"
],
"status": "preview"
}
],
"file_sets": [
{
"@id": "/measurement-sets/IGVFDS3862EBGW/",
"accession": "IGVFDS3862EBGW",
"aliases": [
"igvf:corces_measurementSet_X055_G5_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS1508FUGO/",
"accession": "IGVFDS1508FUGO",
"aliases": [
"igvf:corces_measurementSet_X055_G5_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS0860RBBW/",
"accession": "IGVFDS0860RBBW",
"aliases": [
"igvf:corces_measurementSet_X055_G4_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS8654DWFA/",
"accession": "IGVFDS8654DWFA",
"aliases": [
"igvf:corces_measurementSet_X055_G4_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS6887BMNC/",
"accession": "IGVFDS6887BMNC",
"aliases": [
"igvf:corces_measurementSet_X055_G7_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS7612PDSF/",
"accession": "IGVFDS7612PDSF",
"aliases": [
"igvf:corces_measurementSet_X055_G7_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS2429KQKR/",
"accession": "IGVFDS2429KQKR",
"aliases": [
"igvf:corces_measurementSet_X055_G1_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS2214PPGL/",
"accession": "IGVFDS2214PPGL",
"aliases": [
"igvf:corces_measurementSet_X055_G1_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS1908CVYZ/",
"accession": "IGVFDS1908CVYZ",
"aliases": [
"igvf:corces_measurementSet_X055_G3_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS0806KYMP/",
"accession": "IGVFDS0806KYMP",
"aliases": [
"igvf:corces_measurementSet_X055_G3_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS0934FOEY/",
"accession": "IGVFDS0934FOEY",
"aliases": [
"igvf:corces_measurementSet_X055_G6_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS6107EDWK/",
"accession": "IGVFDS6107EDWK",
"aliases": [
"igvf:corces_measurementSet_X055_G6_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS8217CROI/",
"accession": "IGVFDS8217CROI",
"aliases": [
"igvf:corces_measurementSet_X055_G8_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS4364OVPJ/",
"accession": "IGVFDS4364OVPJ",
"aliases": [
"igvf:corces_measurementSet_X055_G8_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS0887WUCN/",
"accession": "IGVFDS0887WUCN",
"aliases": [
"igvf:corces_measurementSet_X055_G2_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS1090PWDE/",
"accession": "IGVFDS1090PWDE",
"aliases": [
"igvf:corces_measurementSet_X055_G2_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
}
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/f7742e0d-bba4-4ca3-ab80-71c7364f24e7/",
"certificate_identifier": "IP115-05",
"controlled_access": false,
"status": "in progress"
}
],
"lab": {
"@id": "/labs/ryan-corces/",
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"lower_bound_age": 79,
"lower_bound_age_in_hours": 692040,
"multiplexed_in": [
{
"@id": "/multiplexed-samples/IGVFSM5353OLLQ/",
"accession": "IGVFSM5353OLLQ",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM1455UODN/",
"accession": "IGVFSM1455UODN",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM5427KDIM/",
"accession": "IGVFSM5427KDIM",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM5198TYYK/",
"accession": "IGVFSM5198TYYK",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM4258KEGB/",
"accession": "IGVFSM4258KEGB",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM7480SMLA/",
"accession": "IGVFSM7480SMLA",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM5197XOVP/",
"accession": "IGVFSM5197XOVP",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM4337BEFD/",
"accession": "IGVFSM4337BEFD",
"status": "preview"
}
],
"origin_of": [],
"part_of": "/tissues/IGVFSM1635KPCN/",
"parts": [],
"pmi": 258,
"pmi_units": "minute",
"pooled_in": [],
"preservation_method": "flash-freezing",
"protocols": [
"https://www.protocols.io/view/isolation-of-nuclei-from-frozen-tissue-for-snmulti-6uchesw"
],
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0002771/",
"status": "preview",
"term_name": "middle temporal gyrus"
}
],
"schema_version": "21",
"sex": "male",
"sorted_fractions": [],
"sources": [
{
"@id": "/sources/banner-health/",
"status": "released",
"title": "Banner Health"
}
],
"status": "preview",
"submitted_by": {
"@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
"title": "Ryan Corces"
},
"summary": "Homo sapiens (male, 79 years) middle temporal gyrus tissue",
"taxa": "Homo sapiens",
"upper_bound_age": 79,
"upper_bound_age_in_hours": 692040,
"uuid": "ff8b2b63-5539-4cb1-b088-901402fdaba4",
"virtual": false
}