putamen — IGVFSM2996BWPB

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Summary

Homo sapiens (male, 78 years) putamen tissue associated with Parkinson's disease

Sample Terms

Sex

male

Age

78 years

Part of Sample

Post-mortem Interval

250 minutes

Preservation Method

flash-freezing

Taxa

Homo sapiens

Sources

Date Harvested

October 24, 2022

Aliases

igvf:corces_tissue_BANN2103_PUT_B1

Protocols

https://www.protocols.io/view/isolation-of-nuclei-from-frozen-tissue-for-snmulti-6uchesw

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Donors

1 item

Accession

Aliases

Sex

Taxa

igvf:corces_donor_BANN2103

male

Homo sapiens

File Sets

16 items

single-nucleus ATAC-seq (10x multiome)

igvf:corces_measurementSet_X010_G5_ATAC

Ryan Corces, Gladstone Institute UCSF

single-nucleus ATAC-seq (10x multiome)

igvf:corces_measurementSet_X010_G2_ATAC

Ryan Corces, Gladstone Institute UCSF

single-nucleus ATAC-seq (10x multiome)

igvf:corces_measurementSet_X010_G6_ATAC

Ryan Corces, Gladstone Institute UCSF

single-nucleus RNA sequencing assay (10x multiome)

igvf:corces_measurementSet_X010_G1_RNA

Ryan Corces, Gladstone Institute UCSF

single-nucleus ATAC-seq (10x multiome)

igvf:corces_measurementSet_X010_G1_ATAC

Ryan Corces, Gladstone Institute UCSF

single-nucleus RNA sequencing assay (10x multiome)

igvf:corces_measurementSet_X010_G3_RNA

Ryan Corces, Gladstone Institute UCSF

single-nucleus ATAC-seq (10x multiome)

igvf:corces_measurementSet_X010_G3_ATAC

Ryan Corces, Gladstone Institute UCSF

single-nucleus ATAC-seq (10x multiome)

igvf:corces_measurementSet_X010_G4_ATAC

Ryan Corces, Gladstone Institute UCSF

single-nucleus RNA sequencing assay (10x multiome)

igvf:corces_measurementSet_X010_G4_RNA

Ryan Corces, Gladstone Institute UCSF

single-nucleus RNA sequencing assay (10x multiome)

igvf:corces_measurementSet_X010_G2_RNA

Ryan Corces, Gladstone Institute UCSF

Multiplexed In Samples

8 items

Sample Terms

Disease Terms

Summary

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (male, 92 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (female, 86 years) substantia nigra tissue associated with Parkinson's disease; ... and 10 more samples

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (male, 92 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (female, 86 years) substantia nigra tissue associated with Parkinson's disease; ... and 10 more samples

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (male, 92 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (female, 86 years) substantia nigra tissue associated with Parkinson's disease; ... and 10 more samples

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (male, 92 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (female, 86 years) substantia nigra tissue associated with Parkinson's disease; ... and 10 more samples

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (male, 92 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (female, 86 years) substantia nigra tissue associated with Parkinson's disease; ... and 10 more samples

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (male, 92 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (female, 86 years) substantia nigra tissue associated with Parkinson's disease; ... and 10 more samples

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (male, 92 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (female, 86 years) substantia nigra tissue associated with Parkinson's disease; ... and 10 more samples

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (male, 92 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (female, 86 years) substantia nigra tissue associated with Parkinson's disease; ... and 10 more samples