posterior cingulate gyrus — IGVFSM2881YKLM

1{
2    "@context": "/terms/",
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4    "@type": [
5        "Tissue",
6        "Biosample",
7        "Sample",
8        "Item"
9    ],
10    "accession": "IGVFSM2881YKLM",
11    "age": "90 or above",
12    "age_units": "year",
13    "aliases": [
14        "igvf:corces_tissue_BANN1750_CING_B1"
15    ],
16    "audit": {
17        "INTERNAL_ACTION": [
18            {
19                "category": "missing CCF ID",
20                "detail": "Tissue [IGVFSM2881YKLM](/tissues/IGVFSM2881YKLM/) is missing a `ccf_id`. Human tissues are expected to specify a common coordinate framework identifier (CCF ID).",
21                "level": 30,
22                "level_name": "INTERNAL_ACTION",
23                "name": "audit_tissue_ccf_id",
24                "path": "/tissues/IGVFSM2881YKLM/"
25            }
26        ]
27    },
28    "award": {
29        "@id": "/awards/HG012076/",
30        "component": "mapping"
31    },
32    "classifications": [
33        "tissue"
34    ],
35    "creation_timestamp": "2025-03-19T12:58:29.009955+00:00",
36    "date_obtained": "2023-03-15",
37    "donors": [
38        {
39            "@id": "/human-donors/IGVFDO0411QFOF/",
40            "accession": "IGVFDO0411QFOF",
41            "ethnicities": [
42                "European"
43            ],
44            "status": "preview"
45        }
46    ],
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53            ],
54            "file_set_type": "experimental data",
55            "lab": {
56                "title": "Ryan Corces, Gladstone Institute UCSF"
57            },
58            "preferred_assay_title": "10x multiome",
59            "status": "preview",
60            "summary": "single-nucleus ATAC-seq (10x multiome)"
61        },
62        {
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64            "accession": "IGVFDS0368CEBZ",
65            "aliases": [
66                "igvf:corces_measurementSet_X044_G7_RNA"
67            ],
68            "file_set_type": "experimental data",
69            "lab": {
70                "title": "Ryan Corces, Gladstone Institute UCSF"
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72            "preferred_assay_title": "10x multiome",
73            "status": "preview",
74            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
75        },
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83            "lab": {
84                "title": "Ryan Corces, Gladstone Institute UCSF"
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86            "preferred_assay_title": "10x multiome",
87            "status": "preview",
88            "summary": "single-nucleus ATAC-seq (10x multiome)"
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98                "title": "Ryan Corces, Gladstone Institute UCSF"
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101            "status": "preview",
102            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
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111            "lab": {
112                "title": "Ryan Corces, Gladstone Institute UCSF"
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115            "status": "preview",
116            "summary": "single-nucleus ATAC-seq (10x multiome)"
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124            "file_set_type": "experimental data",
125            "lab": {
126                "title": "Ryan Corces, Gladstone Institute UCSF"
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128            "preferred_assay_title": "10x multiome",
129            "status": "preview",
130            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
131        },
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139            "lab": {
140                "title": "Ryan Corces, Gladstone Institute UCSF"
141            },
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143            "status": "preview",
144            "summary": "single-nucleus ATAC-seq (10x multiome)"
145        },
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153            "lab": {
154                "title": "Ryan Corces, Gladstone Institute UCSF"
155            },
156            "preferred_assay_title": "10x multiome",
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158            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
159        },
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167            "lab": {
168                "title": "Ryan Corces, Gladstone Institute UCSF"
169            },
170            "preferred_assay_title": "10x multiome",
171            "status": "preview",
172            "summary": "single-nucleus ATAC-seq (10x multiome)"
173        },
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182                "title": "Ryan Corces, Gladstone Institute UCSF"
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186            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
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196                "title": "Ryan Corces, Gladstone Institute UCSF"
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200            "summary": "single-nucleus ATAC-seq (10x multiome)"
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210                "title": "Ryan Corces, Gladstone Institute UCSF"
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214            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
215        },
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223            "lab": {
224                "title": "Ryan Corces, Gladstone Institute UCSF"
225            },
226            "preferred_assay_title": "10x multiome",
227            "status": "preview",
228            "summary": "single-nucleus ATAC-seq (10x multiome)"
229        },
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237            "lab": {
238                "title": "Ryan Corces, Gladstone Institute UCSF"
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241            "status": "preview",
242            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
243        },
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251            "lab": {
252                "title": "Ryan Corces, Gladstone Institute UCSF"
253            },
254            "preferred_assay_title": "10x multiome",
255            "status": "preview",
256            "summary": "single-nucleus ATAC-seq (10x multiome)"
257        },
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265            "lab": {
266                "title": "Ryan Corces, Gladstone Institute UCSF"
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269            "status": "preview",
270            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
271        }
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278            "status": "in progress"
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281    "lab": {
282        "@id": "/labs/ryan-corces/",
283        "title": "Ryan Corces, Gladstone Institute UCSF"
284    },
285    "lower_bound_age": 90,
286    "lower_bound_age_in_hours": 788400,
287    "multiplexed_in": [
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301            "status": "preview"
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311            "status": "preview"
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315            "accession": "IGVFSM3425YHKS",
316            "status": "preview"
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318        {
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320            "accession": "IGVFSM2720AOAW",
321            "status": "preview"
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323        {
324            "@id": "/multiplexed-samples/IGVFSM3090RRWU/",
325            "accession": "IGVFSM3090RRWU",
326            "status": "preview"
327        }
328    ],
329    "origin_of": [],
330    "part_of": "/tissues/IGVFSM3788CEBX/",
331    "parts": [],
332    "pmi": 205,
333    "pmi_units": "minute",
334    "pooled_in": [],
335    "preservation_method": "flash-freezing",
336    "protocols": [
337        "https://www.protocols.io/view/isolation-of-nuclei-from-frozen-tissue-for-snmulti-6uchesw"
338    ],
339    "sample_terms": [
340        {
341            "@id": "/sample-terms/UBERON_0002740/",
342            "status": "preview",
343            "term_name": "posterior cingulate gyrus"
344        }
345    ],
346    "schema_version": "21",
347    "sex": "male",
348    "sorted_fractions": [],
349    "sources": [
350        {
351            "@id": "/sources/banner-health/",
352            "status": "released",
353            "title": "Banner Health"
354        }
355    ],
356    "status": "preview",
357    "submitted_by": {
358        "@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
359        "title": "Ryan Corces"
360    },
361    "summary": "Homo sapiens (male, 90 or above years) posterior cingulate gyrus tissue",
362    "taxa": "Homo sapiens",
363    "upper_bound_age": 90,
364    "upper_bound_age_in_hours": 788400,
365    "uuid": "efd1d2fa-81d5-4939-a90e-28914a232d61",
366    "virtual": false
367}