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putamen — IGVFSM2183DOFN
putamen — IGVFSM2183DOFN
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Summary
Homo sapiens (female, 82 years) putamen tissue associated with cerebral amyloid angiopathy
Sample Terms
putamen
Sex
female
Age
82 years
Post-mortem Interval
124 minutes
Preservation Method
flash-freezing
Taxa
Homo sapiens
Sources
banner-health
Date Harvested
October 4, 2022
Aliases
igvf:corces_tissue_BANN1546_PUT
Protocols
https://www.protocols.io/view/isolation-of-nuclei-from-frozen-tissue-for-snmulti-6uchesw
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO8504RBEL
igvf:corces_donor_BANN1546
female
Homo sapiens
File Sets
16 items
1
2
Accession
Summary
Aliases
Lab
IGVFDS0104JXQJ
single-nucleus RNA sequencing assay (10x multiome)
igvf:corces_measurementSet_X005_G3_RNA
Ryan Corces, Gladstone Institute UCSF
IGVFDS1448UYDZ
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_X005_G7_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS1493FGGS
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_X005_G8_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS2253HXOS
single-nucleus RNA sequencing assay (10x multiome)
igvf:corces_measurementSet_X005_G1_RNA
Ryan Corces, Gladstone Institute UCSF
IGVFDS2328NLDU
single-nucleus RNA sequencing assay (10x multiome)
igvf:corces_measurementSet_X005_G6_RNA
Ryan Corces, Gladstone Institute UCSF
IGVFDS3200KMON
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_X005_G5_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS3572LAIM
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_X005_G1_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS5901XMYG
single-nucleus RNA sequencing assay (10x multiome)
igvf:corces_measurementSet_X005_G5_RNA
Ryan Corces, Gladstone Institute UCSF
IGVFDS6220HECG
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_X005_G6_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS6879FAZM
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_X005_G4_ATAC
Ryan Corces, Gladstone Institute UCSF
Multiplexed In Samples
8 items
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM0319SKVZ
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 87 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 82 years) putamen tissue associated with cerebral amyloid angiopathy; ... and 10 more samples
IGVFSM2834NWJT
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 87 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 82 years) putamen tissue associated with cerebral amyloid angiopathy; ... and 10 more samples
IGVFSM4397IWWF
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 87 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 82 years) putamen tissue associated with cerebral amyloid angiopathy; ... and 10 more samples
IGVFSM5849MWXQ
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 87 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 82 years) putamen tissue associated with cerebral amyloid angiopathy; ... and 10 more samples
IGVFSM5971KNFX
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 87 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 82 years) putamen tissue associated with cerebral amyloid angiopathy; ... and 10 more samples
IGVFSM6427JBTA
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 87 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 82 years) putamen tissue associated with cerebral amyloid angiopathy; ... and 10 more samples
IGVFSM6709GBQC
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 87 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 82 years) putamen tissue associated with cerebral amyloid angiopathy; ... and 10 more samples
IGVFSM7229CBLF
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 87 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 82 years) putamen tissue associated with cerebral amyloid angiopathy; ... and 10 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ryan Corces, Gladstone Institute UCSF