{
"@context": "/terms/",
"@id": "/tissues/IGVFSM1342BWCQ/",
"@type": [
"Tissue",
"Biosample",
"Sample",
"Item"
],
"accession": "IGVFSM1342BWCQ",
"age": "74",
"age_units": "year",
"aliases": [
"igvf:corces_tissue_BANN1070_CING_B1"
],
"audit": {
"INTERNAL_ACTION": [
{
"category": "missing CCF ID",
"detail": "Tissue [IGVFSM1342BWCQ](/tissues/IGVFSM1342BWCQ/) is missing a `ccf_id`. Human tissues are expected to specify a common coordinate framework identifier (CCF ID).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_tissue_ccf_id",
"path": "/tissues/IGVFSM1342BWCQ/"
}
]
},
"award": {
"@id": "/awards/HG012076/",
"component": "mapping"
},
"classifications": [
"tissue"
],
"creation_timestamp": "2025-03-19T12:57:40.807051+00:00",
"date_obtained": "2022-11-10",
"donors": [
{
"@id": "/human-donors/IGVFDO5214IKNF/",
"accession": "IGVFDO5214IKNF",
"ethnicities": [
"European"
],
"status": "preview"
}
],
"file_sets": [
{
"@id": "/measurement-sets/IGVFDS7886HWSY/",
"accession": "IGVFDS7886HWSY",
"aliases": [
"igvf:corces_measurementSet_X015_G3_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS3006BMZG/",
"accession": "IGVFDS3006BMZG",
"aliases": [
"igvf:corces_measurementSet_X015_G3_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS7588LMFF/",
"accession": "IGVFDS7588LMFF",
"aliases": [
"igvf:corces_measurementSet_X015_G5_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS7131KXFQ/",
"accession": "IGVFDS7131KXFQ",
"aliases": [
"igvf:corces_measurementSet_X015_G5_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS2662CWSH/",
"accession": "IGVFDS2662CWSH",
"aliases": [
"igvf:corces_measurementSet_X015_G4_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS1205RUZB/",
"accession": "IGVFDS1205RUZB",
"aliases": [
"igvf:corces_measurementSet_X015_G4_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS8338UULL/",
"accession": "IGVFDS8338UULL",
"aliases": [
"igvf:corces_measurementSet_X015_G6_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS0289RYKJ/",
"accession": "IGVFDS0289RYKJ",
"aliases": [
"igvf:corces_measurementSet_X015_G6_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS8837ROGQ/",
"accession": "IGVFDS8837ROGQ",
"aliases": [
"igvf:corces_measurementSet_X015_G8_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS2136YVPM/",
"accession": "IGVFDS2136YVPM",
"aliases": [
"igvf:corces_measurementSet_X015_G8_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS3284TIFO/",
"accession": "IGVFDS3284TIFO",
"aliases": [
"igvf:corces_measurementSet_X015_G2_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS9453WGVI/",
"accession": "IGVFDS9453WGVI",
"aliases": [
"igvf:corces_measurementSet_X015_G2_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS8878QFCW/",
"accession": "IGVFDS8878QFCW",
"aliases": [
"igvf:corces_measurementSet_X015_G1_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS5893RSDQ/",
"accession": "IGVFDS5893RSDQ",
"aliases": [
"igvf:corces_measurementSet_X015_G1_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS3411RFHG/",
"accession": "IGVFDS3411RFHG",
"aliases": [
"igvf:corces_measurementSet_X015_G7_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS1607VGTH/",
"accession": "IGVFDS1607VGTH",
"aliases": [
"igvf:corces_measurementSet_X015_G7_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS6778JTHZ/",
"accession": "IGVFDS6778JTHZ",
"aliases": [
"igvf:corces_measurementSet_RP017_G4_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS5441GNGR/",
"accession": "IGVFDS5441GNGR",
"aliases": [
"igvf:corces_measurementSet_RP017_G4_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS6703RFLO/",
"accession": "IGVFDS6703RFLO",
"aliases": [
"igvf:corces_measurementSet_RP017_G1_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS3632OOWJ/",
"accession": "IGVFDS3632OOWJ",
"aliases": [
"igvf:corces_measurementSet_RP017_G1_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS3192IDFV/",
"accession": "IGVFDS3192IDFV",
"aliases": [
"igvf:corces_measurementSet_RP017_G2_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS6469UTWA/",
"accession": "IGVFDS6469UTWA",
"aliases": [
"igvf:corces_measurementSet_RP017_G2_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS9366EKYM/",
"accession": "IGVFDS9366EKYM",
"aliases": [
"igvf:corces_measurementSet_RP017_G3_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS9780HOAQ/",
"accession": "IGVFDS9780HOAQ",
"aliases": [
"igvf:corces_measurementSet_RP017_G3_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
}
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/f7742e0d-bba4-4ca3-ab80-71c7364f24e7/",
"certificate_identifier": "IP115-05",
"controlled_access": false,
"status": "in progress"
}
],
"lab": {
"@id": "/labs/ryan-corces/",
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"lower_bound_age": 74,
"lower_bound_age_in_hours": 648240,
"multiplexed_in": [
{
"@id": "/multiplexed-samples/IGVFSM9749BFVC/",
"accession": "IGVFSM9749BFVC",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM4134PPFH/",
"accession": "IGVFSM4134PPFH",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM1366AGHP/",
"accession": "IGVFSM1366AGHP",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM1243ZSOP/",
"accession": "IGVFSM1243ZSOP",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM9878TZLL/",
"accession": "IGVFSM9878TZLL",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM7474GXHG/",
"accession": "IGVFSM7474GXHG",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM3424EEIT/",
"accession": "IGVFSM3424EEIT",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM5630CGRI/",
"accession": "IGVFSM5630CGRI",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM6377ARDR/",
"accession": "IGVFSM6377ARDR",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM0214EVMC/",
"accession": "IGVFSM0214EVMC",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM8995INHU/",
"accession": "IGVFSM8995INHU",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM6067ILMK/",
"accession": "IGVFSM6067ILMK",
"status": "preview"
}
],
"origin_of": [],
"part_of": "/tissues/IGVFSM8203NOVZ/",
"parts": [],
"pmi": 195,
"pmi_units": "minute",
"pooled_in": [],
"preservation_method": "flash-freezing",
"protocols": [
"https://www.protocols.io/view/isolation-of-nuclei-from-frozen-tissue-for-snmulti-6uchesw"
],
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0002740/",
"status": "preview",
"term_name": "posterior cingulate gyrus"
}
],
"schema_version": "21",
"sex": "male",
"sorted_fractions": [],
"sources": [
{
"@id": "/sources/banner-health/",
"status": "released",
"title": "Banner Health"
}
],
"status": "preview",
"submitted_by": {
"@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
"title": "Ryan Corces"
},
"summary": "Homo sapiens (male, 74 years) posterior cingulate gyrus tissue",
"taxa": "Homo sapiens",
"upper_bound_age": 74,
"upper_bound_age_in_hours": 648240,
"uuid": "7bdfaff2-c9cc-4dc2-b4c8-3993d2e1f4de",
"virtual": false
}