middle temporal gyrus — IGVFSM1158XMKT

preview
1{
2    "@context": "/terms/",
3    "@id": "/tissues/IGVFSM1158XMKT/",
4    "@type": [
5        "Tissue",
6        "Biosample",
7        "Sample",
8        "Item"
9    ],
10    "accession": "IGVFSM1158XMKT",
11    "age": "70",
12    "age_units": "year",
13    "aliases": [
14        "igvf:corces_tissue_BANN0210_MTG"
15    ],
16    "audit": {
17        "INTERNAL_ACTION": [
18            {
19                "category": "mismatched status",
20                "detail": "Preview tissue [IGVFSM1158XMKT](/tissues/IGVFSM1158XMKT/) has in progress subobject phenotype term [DOID_14330](/phenotype-terms/DOID_14330/).",
21                "level": 30,
22                "level_name": "INTERNAL_ACTION",
23                "name": "audit_item_status",
24                "path": "/tissues/IGVFSM1158XMKT/"
25            },
26            {
27                "category": "missing CCF ID",
28                "detail": "Tissue [IGVFSM1158XMKT](/tissues/IGVFSM1158XMKT/) is missing a `ccf_id`. Human tissues are expected to specify a common coordinate framework identifier (CCF ID).",
29                "level": 30,
30                "level_name": "INTERNAL_ACTION",
31                "name": "audit_tissue_ccf_id",
32                "path": "/tissues/IGVFSM1158XMKT/"
33            }
34        ]
35    },
36    "award": {
37        "@id": "/awards/HG012076/",
38        "component": "mapping"
39    },
40    "classifications": [
41        "tissue"
42    ],
43    "creation_timestamp": "2025-03-19T04:16:44.129445+00:00",
44    "date_obtained": "2022-12-05",
45    "disease_terms": [
46        {
47            "@id": "/phenotype-terms/MONDO_0004975/",
48            "status": "released",
49            "term_name": "Alzheimer disease"
50        },
51        {
52            "@id": "/phenotype-terms/DOID_14330/",
53            "status": "in progress",
54            "term_name": "Parkinson's disease"
55        }
56    ],
57    "donors": [
58        {
59            "@id": "/human-donors/IGVFDO6513APBX/",
60            "accession": "IGVFDO6513APBX",
61            "ethnicities": [
62                "European"
63            ],
64            "status": "preview"
65        }
66    ],
67    "file_sets": [],
68    "institutional_certificates": [
69        {
70            "@id": "/institutional-certificates/f7742e0d-bba4-4ca3-ab80-71c7364f24e7/",
71            "certificate_identifier": "IP115-05",
72            "controlled_access": false,
73            "status": "in progress"
74        }
75    ],
76    "lab": {
77        "@id": "/labs/ryan-corces/",
78        "title": "Ryan Corces, Gladstone Institute UCSF"
79    },
80    "lower_bound_age": 70,
81    "lower_bound_age_in_hours": 613200,
82    "multiplexed_in": [],
83    "origin_of": [],
84    "parts": [
85        "/tissues/IGVFSM2707XLKG/",
86        "/tissues/IGVFSM2027EIYI/"
87    ],
88    "pmi": 210,
89    "pmi_units": "minute",
90    "pooled_in": [],
91    "preservation_method": "flash-freezing",
92    "protocols": [
93        "https://www.protocols.io/view/isolation-of-nuclei-from-frozen-tissue-for-snmulti-6uchesw"
94    ],
95    "sample_terms": [
96        {
97            "@id": "/sample-terms/UBERON_0002771/",
98            "status": "preview",
99            "term_name": "middle temporal gyrus"
100        }
101    ],
102    "schema_version": "21",
103    "sex": "male",
104    "sorted_fractions": [],
105    "sources": [
106        {
107            "@id": "/sources/banner-health/",
108            "status": "released",
109            "title": "Banner Health"
110        }
111    ],
112    "status": "preview",
113    "submitted_by": {
114        "@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
115        "title": "Ryan Corces"
116    },
117    "summary": "Homo sapiens (male, 70 years) middle temporal gyrus tissue associated with Alzheimer disease, Parkinson's disease",
118    "taxa": "Homo sapiens",
119    "upper_bound_age": 70,
120    "upper_bound_age_in_hours": 613200,
121    "uuid": "232bfd08-7749-4cf5-8b9b-5a6f00cead99",
122    "virtual": false
123}