{
"@context": "/terms/",
"@id": "/tissues/IGVFSM0664SEVK/",
"@type": [
"Tissue",
"Biosample",
"Sample",
"Item"
],
"accession": "IGVFSM0664SEVK",
"age": "82",
"age_units": "year",
"aliases": [
"igvf:corces_tissue_BANN1546_MTG"
],
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Preview tissue [IGVFSM0664SEVK](/tissues/IGVFSM0664SEVK/) has in progress subobject phenotype term [DOID_9246](/phenotype-terms/DOID_9246/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/tissues/IGVFSM0664SEVK/"
},
{
"category": "missing CCF ID",
"detail": "Tissue [IGVFSM0664SEVK](/tissues/IGVFSM0664SEVK/) is missing a `ccf_id`. Human tissues are expected to specify a common coordinate framework identifier (CCF ID).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_tissue_ccf_id",
"path": "/tissues/IGVFSM0664SEVK/"
}
]
},
"award": {
"@id": "/awards/HG012076/",
"component": "mapping"
},
"classifications": [
"tissue"
],
"creation_timestamp": "2025-03-19T04:11:42.491415+00:00",
"date_obtained": "2023-01-12",
"disease_terms": [
{
"@id": "/phenotype-terms/DOID_9246/",
"status": "in progress",
"term_name": "cerebral amyloid angiopathy"
}
],
"donors": [
{
"@id": "/human-donors/IGVFDO8504RBEL/",
"accession": "IGVFDO8504RBEL",
"ethnicities": [
"European"
],
"status": "preview"
}
],
"file_sets": [
{
"@id": "/measurement-sets/IGVFDS9821UHEX/",
"accession": "IGVFDS9821UHEX",
"aliases": [
"igvf:corces_measurementSet_X028_G1_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS9330PDLC/",
"accession": "IGVFDS9330PDLC",
"aliases": [
"igvf:corces_measurementSet_X028_G1_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS1524WKTN/",
"accession": "IGVFDS1524WKTN",
"aliases": [
"igvf:corces_measurementSet_X028_G3_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS4780LCVB/",
"accession": "IGVFDS4780LCVB",
"aliases": [
"igvf:corces_measurementSet_X028_G3_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS0501ORTA/",
"accession": "IGVFDS0501ORTA",
"aliases": [
"igvf:corces_measurementSet_X028_G4_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS2675HBRY/",
"accession": "IGVFDS2675HBRY",
"aliases": [
"igvf:corces_measurementSet_X028_G4_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS3718OSOX/",
"accession": "IGVFDS3718OSOX",
"aliases": [
"igvf:corces_measurementSet_X028_G2_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS4319JYXA/",
"accession": "IGVFDS4319JYXA",
"aliases": [
"igvf:corces_measurementSet_X028_G2_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS6930SNMF/",
"accession": "IGVFDS6930SNMF",
"aliases": [
"igvf:corces_measurementSet_X028_G5_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS8552WQEE/",
"accession": "IGVFDS8552WQEE",
"aliases": [
"igvf:corces_measurementSet_X028_G5_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS2315CNRX/",
"accession": "IGVFDS2315CNRX",
"aliases": [
"igvf:corces_measurementSet_X028_G8_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS2256ZOZQ/",
"accession": "IGVFDS2256ZOZQ",
"aliases": [
"igvf:corces_measurementSet_X028_G8_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS7362VJGH/",
"accession": "IGVFDS7362VJGH",
"aliases": [
"igvf:corces_measurementSet_X028_G6_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS0953NSGI/",
"accession": "IGVFDS0953NSGI",
"aliases": [
"igvf:corces_measurementSet_X028_G6_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS3858ZAQM/",
"accession": "IGVFDS3858ZAQM",
"aliases": [
"igvf:corces_measurementSet_X028_G7_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS1013LBEZ/",
"accession": "IGVFDS1013LBEZ",
"aliases": [
"igvf:corces_measurementSet_X028_G7_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS8528XJMX/",
"accession": "IGVFDS8528XJMX",
"aliases": [
"igvf:corces_measurementSet_RP018_G1_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS8319TUBW/",
"accession": "IGVFDS8319TUBW",
"aliases": [
"igvf:corces_measurementSet_RP018_G1_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS1869XCPD/",
"accession": "IGVFDS1869XCPD",
"aliases": [
"igvf:corces_measurementSet_RP018_G2_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS3371UYOY/",
"accession": "IGVFDS3371UYOY",
"aliases": [
"igvf:corces_measurementSet_RP018_G2_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS8112LERP/",
"accession": "IGVFDS8112LERP",
"aliases": [
"igvf:corces_measurementSet_RP018_G4_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS7572ZDYQ/",
"accession": "IGVFDS7572ZDYQ",
"aliases": [
"igvf:corces_measurementSet_RP018_G4_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS3423DTHY/",
"accession": "IGVFDS3423DTHY",
"aliases": [
"igvf:corces_measurementSet_RP018_G5_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS8678BJVO/",
"accession": "IGVFDS8678BJVO",
"aliases": [
"igvf:corces_measurementSet_RP018_G5_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS4938ZDAY/",
"accession": "IGVFDS4938ZDAY",
"aliases": [
"igvf:corces_measurementSet_RP018_G6_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS2371MSDM/",
"accession": "IGVFDS2371MSDM",
"aliases": [
"igvf:corces_measurementSet_RP018_G6_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS2873YXDP/",
"accession": "IGVFDS2873YXDP",
"aliases": [
"igvf:corces_measurementSet_RP018_G3_ATAC"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus ATAC-seq (10x multiome)"
},
{
"@id": "/measurement-sets/IGVFDS9355RKER/",
"accession": "IGVFDS9355RKER",
"aliases": [
"igvf:corces_measurementSet_RP018_G3_RNA"
],
"file_set_type": "experimental data",
"lab": {
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"preferred_assay_title": "10x multiome",
"status": "preview",
"summary": "single-nucleus RNA sequencing assay (10x multiome)"
}
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/f7742e0d-bba4-4ca3-ab80-71c7364f24e7/",
"certificate_identifier": "IP115-05",
"controlled_access": false,
"status": "in progress"
}
],
"lab": {
"@id": "/labs/ryan-corces/",
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"lower_bound_age": 82,
"lower_bound_age_in_hours": 718320,
"multiplexed_in": [
{
"@id": "/multiplexed-samples/IGVFSM6259JSXN/",
"accession": "IGVFSM6259JSXN",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM7150ADFP/",
"accession": "IGVFSM7150ADFP",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM4873ZKQI/",
"accession": "IGVFSM4873ZKQI",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM1341HRWL/",
"accession": "IGVFSM1341HRWL",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM4526FRYV/",
"accession": "IGVFSM4526FRYV",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM8232WDCF/",
"accession": "IGVFSM8232WDCF",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM9719AYTK/",
"accession": "IGVFSM9719AYTK",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM2664KMPG/",
"accession": "IGVFSM2664KMPG",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM3143GHVU/",
"accession": "IGVFSM3143GHVU",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM9675WPZF/",
"accession": "IGVFSM9675WPZF",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM1416OTQT/",
"accession": "IGVFSM1416OTQT",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM7137MKTX/",
"accession": "IGVFSM7137MKTX",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM4716JFLW/",
"accession": "IGVFSM4716JFLW",
"status": "preview"
},
{
"@id": "/multiplexed-samples/IGVFSM0275PBUR/",
"accession": "IGVFSM0275PBUR",
"status": "preview"
}
],
"origin_of": [],
"parts": [],
"pmi": 124,
"pmi_units": "minute",
"pooled_in": [],
"preservation_method": "flash-freezing",
"protocols": [
"https://www.protocols.io/view/isolation-of-nuclei-from-frozen-tissue-for-snmulti-6uchesw"
],
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0002771/",
"status": "preview",
"term_name": "middle temporal gyrus"
}
],
"schema_version": "21",
"sex": "female",
"sorted_fractions": [],
"sources": [
{
"@id": "/sources/banner-health/",
"status": "released",
"title": "Banner Health"
}
],
"status": "preview",
"submitted_by": {
"@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
"title": "Ryan Corces"
},
"summary": "Homo sapiens (female, 82 years) middle temporal gyrus tissue associated with cerebral amyloid angiopathy",
"taxa": "Homo sapiens",
"upper_bound_age": 82,
"upper_bound_age_in_hours": 718320,
"uuid": "219caf02-d406-48cd-92d1-39ec61a7affb",
"virtual": false
}