substantia nigra — IGVFSM0613PQFW

preview
1{
2    "@context": "/terms/",
3    "@id": "/tissues/IGVFSM0613PQFW/",
4    "@type": [
5        "Tissue",
6        "Biosample",
7        "Sample",
8        "Item"
9    ],
10    "accession": "IGVFSM0613PQFW",
11    "age": "84",
12    "age_units": "year",
13    "aliases": [
14        "igvf:corces_tissue_BANN2118_SN"
15    ],
16    "audit": {
17        "INTERNAL_ACTION": [
18            {
19                "category": "mismatched status",
20                "detail": "Preview tissue [IGVFSM0613PQFW](/tissues/IGVFSM0613PQFW/) has in progress subobject phenotype term [DOID_0080832](/phenotype-terms/DOID_0080832/).",
21                "level": 30,
22                "level_name": "INTERNAL_ACTION",
23                "name": "audit_item_status",
24                "path": "/tissues/IGVFSM0613PQFW/"
25            },
26            {
27                "category": "mismatched status",
28                "detail": "Preview tissue [IGVFSM0613PQFW](/tissues/IGVFSM0613PQFW/) has in progress subobject phenotype term [DOID_14330](/phenotype-terms/DOID_14330/).",
29                "level": 30,
30                "level_name": "INTERNAL_ACTION",
31                "name": "audit_item_status",
32                "path": "/tissues/IGVFSM0613PQFW/"
33            },
34            {
35                "category": "missing CCF ID",
36                "detail": "Tissue [IGVFSM0613PQFW](/tissues/IGVFSM0613PQFW/) is missing a `ccf_id`. Human tissues are expected to specify a common coordinate framework identifier (CCF ID).",
37                "level": 30,
38                "level_name": "INTERNAL_ACTION",
39                "name": "audit_tissue_ccf_id",
40                "path": "/tissues/IGVFSM0613PQFW/"
41            }
42        ]
43    },
44    "award": {
45        "@id": "/awards/HG012076/",
46        "component": "mapping"
47    },
48    "classifications": [
49        "tissue"
50    ],
51    "creation_timestamp": "2025-03-19T04:10:33.361583+00:00",
52    "date_obtained": "2022-12-05",
53    "disease_terms": [
54        {
55            "@id": "/phenotype-terms/DOID_14330/",
56            "status": "in progress",
57            "term_name": "Parkinson's disease"
58        },
59        {
60            "@id": "/phenotype-terms/DOID_0080832/",
61            "status": "in progress",
62            "term_name": "mild cognitive impairment"
63        }
64    ],
65    "donors": [
66        {
67            "@id": "/human-donors/IGVFDO6489DOPG/",
68            "accession": "IGVFDO6489DOPG",
69            "ethnicities": [
70                "European"
71            ],
72            "status": "preview"
73        }
74    ],
75    "file_sets": [
76        {
77            "@id": "/measurement-sets/IGVFDS5220YONJ/",
78            "accession": "IGVFDS5220YONJ",
79            "aliases": [
80                "igvf:corces_measurementSet_X020_G7_ATAC"
81            ],
82            "file_set_type": "experimental data",
83            "lab": {
84                "title": "Ryan Corces, Gladstone Institute UCSF"
85            },
86            "preferred_assay_title": "10x multiome",
87            "status": "preview",
88            "summary": "single-nucleus ATAC-seq (10x multiome)"
89        },
90        {
91            "@id": "/measurement-sets/IGVFDS4549BOHM/",
92            "accession": "IGVFDS4549BOHM",
93            "aliases": [
94                "igvf:corces_measurementSet_X020_G7_RNA"
95            ],
96            "file_set_type": "experimental data",
97            "lab": {
98                "title": "Ryan Corces, Gladstone Institute UCSF"
99            },
100            "preferred_assay_title": "10x multiome",
101            "status": "preview",
102            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
103        },
104        {
105            "@id": "/measurement-sets/IGVFDS5874OMSN/",
106            "accession": "IGVFDS5874OMSN",
107            "aliases": [
108                "igvf:corces_measurementSet_X020_G1_ATAC"
109            ],
110            "file_set_type": "experimental data",
111            "lab": {
112                "title": "Ryan Corces, Gladstone Institute UCSF"
113            },
114            "preferred_assay_title": "10x multiome",
115            "status": "preview",
116            "summary": "single-nucleus ATAC-seq (10x multiome)"
117        },
118        {
119            "@id": "/measurement-sets/IGVFDS5329AJFB/",
120            "accession": "IGVFDS5329AJFB",
121            "aliases": [
122                "igvf:corces_measurementSet_X020_G1_RNA"
123            ],
124            "file_set_type": "experimental data",
125            "lab": {
126                "title": "Ryan Corces, Gladstone Institute UCSF"
127            },
128            "preferred_assay_title": "10x multiome",
129            "status": "preview",
130            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
131        },
132        {
133            "@id": "/measurement-sets/IGVFDS6961PMDS/",
134            "accession": "IGVFDS6961PMDS",
135            "aliases": [
136                "igvf:corces_measurementSet_X020_G2_ATAC"
137            ],
138            "file_set_type": "experimental data",
139            "lab": {
140                "title": "Ryan Corces, Gladstone Institute UCSF"
141            },
142            "preferred_assay_title": "10x multiome",
143            "status": "preview",
144            "summary": "single-nucleus ATAC-seq (10x multiome)"
145        },
146        {
147            "@id": "/measurement-sets/IGVFDS8360ZAFQ/",
148            "accession": "IGVFDS8360ZAFQ",
149            "aliases": [
150                "igvf:corces_measurementSet_X020_G2_RNA"
151            ],
152            "file_set_type": "experimental data",
153            "lab": {
154                "title": "Ryan Corces, Gladstone Institute UCSF"
155            },
156            "preferred_assay_title": "10x multiome",
157            "status": "preview",
158            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
159        },
160        {
161            "@id": "/measurement-sets/IGVFDS9718DEQZ/",
162            "accession": "IGVFDS9718DEQZ",
163            "aliases": [
164                "igvf:corces_measurementSet_X020_G3_ATAC"
165            ],
166            "file_set_type": "experimental data",
167            "lab": {
168                "title": "Ryan Corces, Gladstone Institute UCSF"
169            },
170            "preferred_assay_title": "10x multiome",
171            "status": "preview",
172            "summary": "single-nucleus ATAC-seq (10x multiome)"
173        },
174        {
175            "@id": "/measurement-sets/IGVFDS7404CEPF/",
176            "accession": "IGVFDS7404CEPF",
177            "aliases": [
178                "igvf:corces_measurementSet_X020_G3_RNA"
179            ],
180            "file_set_type": "experimental data",
181            "lab": {
182                "title": "Ryan Corces, Gladstone Institute UCSF"
183            },
184            "preferred_assay_title": "10x multiome",
185            "status": "preview",
186            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
187        },
188        {
189            "@id": "/measurement-sets/IGVFDS3199TQBM/",
190            "accession": "IGVFDS3199TQBM",
191            "aliases": [
192                "igvf:corces_measurementSet_X020_G5_ATAC"
193            ],
194            "file_set_type": "experimental data",
195            "lab": {
196                "title": "Ryan Corces, Gladstone Institute UCSF"
197            },
198            "preferred_assay_title": "10x multiome",
199            "status": "preview",
200            "summary": "single-nucleus ATAC-seq (10x multiome)"
201        },
202        {
203            "@id": "/measurement-sets/IGVFDS6483FRHB/",
204            "accession": "IGVFDS6483FRHB",
205            "aliases": [
206                "igvf:corces_measurementSet_X020_G5_RNA"
207            ],
208            "file_set_type": "experimental data",
209            "lab": {
210                "title": "Ryan Corces, Gladstone Institute UCSF"
211            },
212            "preferred_assay_title": "10x multiome",
213            "status": "preview",
214            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
215        },
216        {
217            "@id": "/measurement-sets/IGVFDS8850GXZG/",
218            "accession": "IGVFDS8850GXZG",
219            "aliases": [
220                "igvf:corces_measurementSet_X020_G4_ATAC"
221            ],
222            "file_set_type": "experimental data",
223            "lab": {
224                "title": "Ryan Corces, Gladstone Institute UCSF"
225            },
226            "preferred_assay_title": "10x multiome",
227            "status": "preview",
228            "summary": "single-nucleus ATAC-seq (10x multiome)"
229        },
230        {
231            "@id": "/measurement-sets/IGVFDS2287PFAS/",
232            "accession": "IGVFDS2287PFAS",
233            "aliases": [
234                "igvf:corces_measurementSet_X020_G4_RNA"
235            ],
236            "file_set_type": "experimental data",
237            "lab": {
238                "title": "Ryan Corces, Gladstone Institute UCSF"
239            },
240            "preferred_assay_title": "10x multiome",
241            "status": "preview",
242            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
243        },
244        {
245            "@id": "/measurement-sets/IGVFDS8026EGBN/",
246            "accession": "IGVFDS8026EGBN",
247            "aliases": [
248                "igvf:corces_measurementSet_X020_G6_ATAC"
249            ],
250            "file_set_type": "experimental data",
251            "lab": {
252                "title": "Ryan Corces, Gladstone Institute UCSF"
253            },
254            "preferred_assay_title": "10x multiome",
255            "status": "preview",
256            "summary": "single-nucleus ATAC-seq (10x multiome)"
257        },
258        {
259            "@id": "/measurement-sets/IGVFDS4947JUPE/",
260            "accession": "IGVFDS4947JUPE",
261            "aliases": [
262                "igvf:corces_measurementSet_X020_G6_RNA"
263            ],
264            "file_set_type": "experimental data",
265            "lab": {
266                "title": "Ryan Corces, Gladstone Institute UCSF"
267            },
268            "preferred_assay_title": "10x multiome",
269            "status": "preview",
270            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
271        },
272        {
273            "@id": "/measurement-sets/IGVFDS8867QCQO/",
274            "accession": "IGVFDS8867QCQO",
275            "aliases": [
276                "igvf:corces_measurementSet_X020_G8_ATAC"
277            ],
278            "file_set_type": "experimental data",
279            "lab": {
280                "title": "Ryan Corces, Gladstone Institute UCSF"
281            },
282            "preferred_assay_title": "10x multiome",
283            "status": "preview",
284            "summary": "single-nucleus ATAC-seq (10x multiome)"
285        },
286        {
287            "@id": "/measurement-sets/IGVFDS8340ASDB/",
288            "accession": "IGVFDS8340ASDB",
289            "aliases": [
290                "igvf:corces_measurementSet_X020_G8_RNA"
291            ],
292            "file_set_type": "experimental data",
293            "lab": {
294                "title": "Ryan Corces, Gladstone Institute UCSF"
295            },
296            "preferred_assay_title": "10x multiome",
297            "status": "preview",
298            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
299        },
300        {
301            "@id": "/measurement-sets/IGVFDS7591HPZZ/",
302            "accession": "IGVFDS7591HPZZ",
303            "aliases": [
304                "igvf:corces_measurementSet_RP003_G11_ATAC"
305            ],
306            "file_set_type": "experimental data",
307            "lab": {
308                "title": "Ryan Corces, Gladstone Institute UCSF"
309            },
310            "preferred_assay_title": "10x multiome",
311            "status": "preview",
312            "summary": "single-nucleus ATAC-seq (10x multiome)"
313        },
314        {
315            "@id": "/measurement-sets/IGVFDS3094GPXN/",
316            "accession": "IGVFDS3094GPXN",
317            "aliases": [
318                "igvf:corces_measurementSet_RP003_G11_RNA"
319            ],
320            "file_set_type": "experimental data",
321            "lab": {
322                "title": "Ryan Corces, Gladstone Institute UCSF"
323            },
324            "preferred_assay_title": "10x multiome",
325            "status": "preview",
326            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
327        },
328        {
329            "@id": "/measurement-sets/IGVFDS2649LUVJ/",
330            "accession": "IGVFDS2649LUVJ",
331            "aliases": [
332                "igvf:corces_measurementSet_RP003_G8_ATAC"
333            ],
334            "file_set_type": "experimental data",
335            "lab": {
336                "title": "Ryan Corces, Gladstone Institute UCSF"
337            },
338            "preferred_assay_title": "10x multiome",
339            "status": "preview",
340            "summary": "single-nucleus ATAC-seq (10x multiome)"
341        },
342        {
343            "@id": "/measurement-sets/IGVFDS8121RXJO/",
344            "accession": "IGVFDS8121RXJO",
345            "aliases": [
346                "igvf:corces_measurementSet_RP003_G8_RNA"
347            ],
348            "file_set_type": "experimental data",
349            "lab": {
350                "title": "Ryan Corces, Gladstone Institute UCSF"
351            },
352            "preferred_assay_title": "10x multiome",
353            "status": "preview",
354            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
355        },
356        {
357            "@id": "/measurement-sets/IGVFDS3500WEWQ/",
358            "accession": "IGVFDS3500WEWQ",
359            "aliases": [
360                "igvf:corces_measurementSet_RP003_G10_ATAC"
361            ],
362            "file_set_type": "experimental data",
363            "lab": {
364                "title": "Ryan Corces, Gladstone Institute UCSF"
365            },
366            "preferred_assay_title": "10x multiome",
367            "status": "preview",
368            "summary": "single-nucleus ATAC-seq (10x multiome)"
369        },
370        {
371            "@id": "/measurement-sets/IGVFDS4160BSWK/",
372            "accession": "IGVFDS4160BSWK",
373            "aliases": [
374                "igvf:corces_measurementSet_RP003_G10_RNA"
375            ],
376            "file_set_type": "experimental data",
377            "lab": {
378                "title": "Ryan Corces, Gladstone Institute UCSF"
379            },
380            "preferred_assay_title": "10x multiome",
381            "status": "preview",
382            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
383        },
384        {
385            "@id": "/measurement-sets/IGVFDS4142KOUC/",
386            "accession": "IGVFDS4142KOUC",
387            "aliases": [
388                "igvf:corces_measurementSet_RP003_G6_ATAC"
389            ],
390            "file_set_type": "experimental data",
391            "lab": {
392                "title": "Ryan Corces, Gladstone Institute UCSF"
393            },
394            "preferred_assay_title": "10x multiome",
395            "status": "preview",
396            "summary": "single-nucleus ATAC-seq (10x multiome)"
397        },
398        {
399            "@id": "/measurement-sets/IGVFDS1845DDRG/",
400            "accession": "IGVFDS1845DDRG",
401            "aliases": [
402                "igvf:corces_measurementSet_RP003_G6_RNA"
403            ],
404            "file_set_type": "experimental data",
405            "lab": {
406                "title": "Ryan Corces, Gladstone Institute UCSF"
407            },
408            "preferred_assay_title": "10x multiome",
409            "status": "preview",
410            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
411        },
412        {
413            "@id": "/measurement-sets/IGVFDS3290ZBHS/",
414            "accession": "IGVFDS3290ZBHS",
415            "aliases": [
416                "igvf:corces_measurementSet_RP003_G3_ATAC"
417            ],
418            "file_set_type": "experimental data",
419            "lab": {
420                "title": "Ryan Corces, Gladstone Institute UCSF"
421            },
422            "preferred_assay_title": "10x multiome",
423            "status": "preview",
424            "summary": "single-nucleus ATAC-seq (10x multiome)"
425        },
426        {
427            "@id": "/measurement-sets/IGVFDS0832RLNW/",
428            "accession": "IGVFDS0832RLNW",
429            "aliases": [
430                "igvf:corces_measurementSet_RP003_G3_RNA"
431            ],
432            "file_set_type": "experimental data",
433            "lab": {
434                "title": "Ryan Corces, Gladstone Institute UCSF"
435            },
436            "preferred_assay_title": "10x multiome",
437            "status": "preview",
438            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
439        },
440        {
441            "@id": "/measurement-sets/IGVFDS6536JZLW/",
442            "accession": "IGVFDS6536JZLW",
443            "aliases": [
444                "igvf:corces_measurementSet_RP003_G1_ATAC"
445            ],
446            "file_set_type": "experimental data",
447            "lab": {
448                "title": "Ryan Corces, Gladstone Institute UCSF"
449            },
450            "preferred_assay_title": "10x multiome",
451            "status": "preview",
452            "summary": "single-nucleus ATAC-seq (10x multiome)"
453        },
454        {
455            "@id": "/measurement-sets/IGVFDS8200AYHW/",
456            "accession": "IGVFDS8200AYHW",
457            "aliases": [
458                "igvf:corces_measurementSet_RP003_G1_RNA"
459            ],
460            "file_set_type": "experimental data",
461            "lab": {
462                "title": "Ryan Corces, Gladstone Institute UCSF"
463            },
464            "preferred_assay_title": "10x multiome",
465            "status": "preview",
466            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
467        },
468        {
469            "@id": "/measurement-sets/IGVFDS3115SXPF/",
470            "accession": "IGVFDS3115SXPF",
471            "aliases": [
472                "igvf:corces_measurementSet_RP003_G2_ATAC"
473            ],
474            "file_set_type": "experimental data",
475            "lab": {
476                "title": "Ryan Corces, Gladstone Institute UCSF"
477            },
478            "preferred_assay_title": "10x multiome",
479            "status": "preview",
480            "summary": "single-nucleus ATAC-seq (10x multiome)"
481        },
482        {
483            "@id": "/measurement-sets/IGVFDS9117EHMG/",
484            "accession": "IGVFDS9117EHMG",
485            "aliases": [
486                "igvf:corces_measurementSet_RP003_G2_RNA"
487            ],
488            "file_set_type": "experimental data",
489            "lab": {
490                "title": "Ryan Corces, Gladstone Institute UCSF"
491            },
492            "preferred_assay_title": "10x multiome",
493            "status": "preview",
494            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
495        },
496        {
497            "@id": "/measurement-sets/IGVFDS0476RPPF/",
498            "accession": "IGVFDS0476RPPF",
499            "aliases": [
500                "igvf:corces_measurementSet_RP003_G4_ATAC"
501            ],
502            "file_set_type": "experimental data",
503            "lab": {
504                "title": "Ryan Corces, Gladstone Institute UCSF"
505            },
506            "preferred_assay_title": "10x multiome",
507            "status": "preview",
508            "summary": "single-nucleus ATAC-seq (10x multiome)"
509        },
510        {
511            "@id": "/measurement-sets/IGVFDS5810GJMK/",
512            "accession": "IGVFDS5810GJMK",
513            "aliases": [
514                "igvf:corces_measurementSet_RP003_G4_RNA"
515            ],
516            "file_set_type": "experimental data",
517            "lab": {
518                "title": "Ryan Corces, Gladstone Institute UCSF"
519            },
520            "preferred_assay_title": "10x multiome",
521            "status": "preview",
522            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
523        },
524        {
525            "@id": "/measurement-sets/IGVFDS6758XUNF/",
526            "accession": "IGVFDS6758XUNF",
527            "aliases": [
528                "igvf:corces_measurementSet_RP003_G5_ATAC"
529            ],
530            "file_set_type": "experimental data",
531            "lab": {
532                "title": "Ryan Corces, Gladstone Institute UCSF"
533            },
534            "preferred_assay_title": "10x multiome",
535            "status": "preview",
536            "summary": "single-nucleus ATAC-seq (10x multiome)"
537        },
538        {
539            "@id": "/measurement-sets/IGVFDS0767WGIJ/",
540            "accession": "IGVFDS0767WGIJ",
541            "aliases": [
542                "igvf:corces_measurementSet_RP003_G5_RNA"
543            ],
544            "file_set_type": "experimental data",
545            "lab": {
546                "title": "Ryan Corces, Gladstone Institute UCSF"
547            },
548            "preferred_assay_title": "10x multiome",
549            "status": "preview",
550            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
551        },
552        {
553            "@id": "/measurement-sets/IGVFDS9896NOPL/",
554            "accession": "IGVFDS9896NOPL",
555            "aliases": [
556                "igvf:corces_measurementSet_RP003_G9_ATAC"
557            ],
558            "file_set_type": "experimental data",
559            "lab": {
560                "title": "Ryan Corces, Gladstone Institute UCSF"
561            },
562            "preferred_assay_title": "10x multiome",
563            "status": "preview",
564            "summary": "single-nucleus ATAC-seq (10x multiome)"
565        },
566        {
567            "@id": "/measurement-sets/IGVFDS0572YOVC/",
568            "accession": "IGVFDS0572YOVC",
569            "aliases": [
570                "igvf:corces_measurementSet_RP003_G9_RNA"
571            ],
572            "file_set_type": "experimental data",
573            "lab": {
574                "title": "Ryan Corces, Gladstone Institute UCSF"
575            },
576            "preferred_assay_title": "10x multiome",
577            "status": "preview",
578            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
579        },
580        {
581            "@id": "/measurement-sets/IGVFDS7931RONP/",
582            "accession": "IGVFDS7931RONP",
583            "aliases": [
584                "igvf:corces_measurementSet_RP003_G7_ATAC"
585            ],
586            "file_set_type": "experimental data",
587            "lab": {
588                "title": "Ryan Corces, Gladstone Institute UCSF"
589            },
590            "preferred_assay_title": "10x multiome",
591            "status": "preview",
592            "summary": "single-nucleus ATAC-seq (10x multiome)"
593        },
594        {
595            "@id": "/measurement-sets/IGVFDS1215JKPP/",
596            "accession": "IGVFDS1215JKPP",
597            "aliases": [
598                "igvf:corces_measurementSet_RP003_G7_RNA"
599            ],
600            "file_set_type": "experimental data",
601            "lab": {
602                "title": "Ryan Corces, Gladstone Institute UCSF"
603            },
604            "preferred_assay_title": "10x multiome",
605            "status": "preview",
606            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
607        },
608        {
609            "@id": "/measurement-sets/IGVFDS6049XJYR/",
610            "accession": "IGVFDS6049XJYR",
611            "aliases": [
612                "igvf:corces_measurementSet_RP028_G5_ATAC"
613            ],
614            "file_set_type": "experimental data",
615            "lab": {
616                "title": "Ryan Corces, Gladstone Institute UCSF"
617            },
618            "preferred_assay_title": "10x multiome",
619            "status": "preview",
620            "summary": "single-nucleus ATAC-seq (10x multiome)"
621        },
622        {
623            "@id": "/measurement-sets/IGVFDS0422NVSU/",
624            "accession": "IGVFDS0422NVSU",
625            "aliases": [
626                "igvf:corces_measurementSet_RP028_G5_RNA"
627            ],
628            "file_set_type": "experimental data",
629            "lab": {
630                "title": "Ryan Corces, Gladstone Institute UCSF"
631            },
632            "preferred_assay_title": "10x multiome",
633            "status": "preview",
634            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
635        },
636        {
637            "@id": "/measurement-sets/IGVFDS8544KWZX/",
638            "accession": "IGVFDS8544KWZX",
639            "aliases": [
640                "igvf:corces_measurementSet_RP028_G6_ATAC"
641            ],
642            "file_set_type": "experimental data",
643            "lab": {
644                "title": "Ryan Corces, Gladstone Institute UCSF"
645            },
646            "preferred_assay_title": "10x multiome",
647            "status": "preview",
648            "summary": "single-nucleus ATAC-seq (10x multiome)"
649        },
650        {
651            "@id": "/measurement-sets/IGVFDS3888MBQA/",
652            "accession": "IGVFDS3888MBQA",
653            "aliases": [
654                "igvf:corces_measurementSet_RP028_G6_RNA"
655            ],
656            "file_set_type": "experimental data",
657            "lab": {
658                "title": "Ryan Corces, Gladstone Institute UCSF"
659            },
660            "preferred_assay_title": "10x multiome",
661            "status": "preview",
662            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
663        },
664        {
665            "@id": "/measurement-sets/IGVFDS6045MTVX/",
666            "accession": "IGVFDS6045MTVX",
667            "aliases": [
668                "igvf:corces_measurementSet_RP028_G3_ATAC"
669            ],
670            "file_set_type": "experimental data",
671            "lab": {
672                "title": "Ryan Corces, Gladstone Institute UCSF"
673            },
674            "preferred_assay_title": "10x multiome",
675            "status": "preview",
676            "summary": "single-nucleus ATAC-seq (10x multiome)"
677        },
678        {
679            "@id": "/measurement-sets/IGVFDS6093EGTW/",
680            "accession": "IGVFDS6093EGTW",
681            "aliases": [
682                "igvf:corces_measurementSet_RP028_G3_RNA"
683            ],
684            "file_set_type": "experimental data",
685            "lab": {
686                "title": "Ryan Corces, Gladstone Institute UCSF"
687            },
688            "preferred_assay_title": "10x multiome",
689            "status": "preview",
690            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
691        },
692        {
693            "@id": "/measurement-sets/IGVFDS6132DAES/",
694            "accession": "IGVFDS6132DAES",
695            "aliases": [
696                "igvf:corces_measurementSet_RP028_G1_ATAC"
697            ],
698            "file_set_type": "experimental data",
699            "lab": {
700                "title": "Ryan Corces, Gladstone Institute UCSF"
701            },
702            "preferred_assay_title": "10x multiome",
703            "status": "preview",
704            "summary": "single-nucleus ATAC-seq (10x multiome)"
705        },
706        {
707            "@id": "/measurement-sets/IGVFDS2479BBXN/",
708            "accession": "IGVFDS2479BBXN",
709            "aliases": [
710                "igvf:corces_measurementSet_RP028_G1_RNA"
711            ],
712            "file_set_type": "experimental data",
713            "lab": {
714                "title": "Ryan Corces, Gladstone Institute UCSF"
715            },
716            "preferred_assay_title": "10x multiome",
717            "status": "preview",
718            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
719        },
720        {
721            "@id": "/measurement-sets/IGVFDS7060UGUF/",
722            "accession": "IGVFDS7060UGUF",
723            "aliases": [
724                "igvf:corces_measurementSet_RP028_G4_ATAC"
725            ],
726            "file_set_type": "experimental data",
727            "lab": {
728                "title": "Ryan Corces, Gladstone Institute UCSF"
729            },
730            "preferred_assay_title": "10x multiome",
731            "status": "preview",
732            "summary": "single-nucleus ATAC-seq (10x multiome)"
733        },
734        {
735            "@id": "/measurement-sets/IGVFDS7228OCSP/",
736            "accession": "IGVFDS7228OCSP",
737            "aliases": [
738                "igvf:corces_measurementSet_RP028_G4_RNA"
739            ],
740            "file_set_type": "experimental data",
741            "lab": {
742                "title": "Ryan Corces, Gladstone Institute UCSF"
743            },
744            "preferred_assay_title": "10x multiome",
745            "status": "preview",
746            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
747        },
748        {
749            "@id": "/measurement-sets/IGVFDS5017LSEH/",
750            "accession": "IGVFDS5017LSEH",
751            "aliases": [
752                "igvf:corces_measurementSet_RP028_G8_ATAC"
753            ],
754            "file_set_type": "experimental data",
755            "lab": {
756                "title": "Ryan Corces, Gladstone Institute UCSF"
757            },
758            "preferred_assay_title": "10x multiome",
759            "status": "preview",
760            "summary": "single-nucleus ATAC-seq (10x multiome)"
761        },
762        {
763            "@id": "/measurement-sets/IGVFDS4482CBYL/",
764            "accession": "IGVFDS4482CBYL",
765            "aliases": [
766                "igvf:corces_measurementSet_RP028_G8_RNA"
767            ],
768            "file_set_type": "experimental data",
769            "lab": {
770                "title": "Ryan Corces, Gladstone Institute UCSF"
771            },
772            "preferred_assay_title": "10x multiome",
773            "status": "preview",
774            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
775        },
776        {
777            "@id": "/measurement-sets/IGVFDS2559EFEW/",
778            "accession": "IGVFDS2559EFEW",
779            "aliases": [
780                "igvf:corces_measurementSet_RP028_G2_ATAC"
781            ],
782            "file_set_type": "experimental data",
783            "lab": {
784                "title": "Ryan Corces, Gladstone Institute UCSF"
785            },
786            "preferred_assay_title": "10x multiome",
787            "status": "preview",
788            "summary": "single-nucleus ATAC-seq (10x multiome)"
789        },
790        {
791            "@id": "/measurement-sets/IGVFDS8082SQQI/",
792            "accession": "IGVFDS8082SQQI",
793            "aliases": [
794                "igvf:corces_measurementSet_RP028_G2_RNA"
795            ],
796            "file_set_type": "experimental data",
797            "lab": {
798                "title": "Ryan Corces, Gladstone Institute UCSF"
799            },
800            "preferred_assay_title": "10x multiome",
801            "status": "preview",
802            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
803        },
804        {
805            "@id": "/measurement-sets/IGVFDS6638LYXU/",
806            "accession": "IGVFDS6638LYXU",
807            "aliases": [
808                "igvf:corces_measurementSet_RP028_G7_ATAC"
809            ],
810            "file_set_type": "experimental data",
811            "lab": {
812                "title": "Ryan Corces, Gladstone Institute UCSF"
813            },
814            "preferred_assay_title": "10x multiome",
815            "status": "preview",
816            "summary": "single-nucleus ATAC-seq (10x multiome)"
817        },
818        {
819            "@id": "/measurement-sets/IGVFDS6145VWNH/",
820            "accession": "IGVFDS6145VWNH",
821            "aliases": [
822                "igvf:corces_measurementSet_RP028_G7_RNA"
823            ],
824            "file_set_type": "experimental data",
825            "lab": {
826                "title": "Ryan Corces, Gladstone Institute UCSF"
827            },
828            "preferred_assay_title": "10x multiome",
829            "status": "preview",
830            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
831        }
832    ],
833    "institutional_certificates": [
834        {
835            "@id": "/institutional-certificates/f7742e0d-bba4-4ca3-ab80-71c7364f24e7/",
836            "certificate_identifier": "IP115-05",
837            "controlled_access": false,
838            "status": "in progress"
839        }
840    ],
841    "lab": {
842        "@id": "/labs/ryan-corces/",
843        "title": "Ryan Corces, Gladstone Institute UCSF"
844    },
845    "lower_bound_age": 84,
846    "lower_bound_age_in_hours": 735840,
847    "multiplexed_in": [
848        {
849            "@id": "/multiplexed-samples/IGVFSM1610RAUV/",
850            "accession": "IGVFSM1610RAUV",
851            "status": "preview"
852        },
853        {
854            "@id": "/multiplexed-samples/IGVFSM8305BIVT/",
855            "accession": "IGVFSM8305BIVT",
856            "status": "preview"
857        },
858        {
859            "@id": "/multiplexed-samples/IGVFSM1412FFZX/",
860            "accession": "IGVFSM1412FFZX",
861            "status": "preview"
862        },
863        {
864            "@id": "/multiplexed-samples/IGVFSM4714AXPW/",
865            "accession": "IGVFSM4714AXPW",
866            "status": "preview"
867        },
868        {
869            "@id": "/multiplexed-samples/IGVFSM2684WPNY/",
870            "accession": "IGVFSM2684WPNY",
871            "status": "preview"
872        },
873        {
874            "@id": "/multiplexed-samples/IGVFSM3174JJEO/",
875            "accession": "IGVFSM3174JJEO",
876            "status": "preview"
877        },
878        {
879            "@id": "/multiplexed-samples/IGVFSM1357KOCB/",
880            "accession": "IGVFSM1357KOCB",
881            "status": "preview"
882        },
883        {
884            "@id": "/multiplexed-samples/IGVFSM0063BKTC/",
885            "accession": "IGVFSM0063BKTC",
886            "status": "preview"
887        },
888        {
889            "@id": "/multiplexed-samples/IGVFSM3041DZHH/",
890            "accession": "IGVFSM3041DZHH",
891            "status": "preview"
892        },
893        {
894            "@id": "/multiplexed-samples/IGVFSM9787UROU/",
895            "accession": "IGVFSM9787UROU",
896            "status": "preview"
897        },
898        {
899            "@id": "/multiplexed-samples/IGVFSM9300FBPH/",
900            "accession": "IGVFSM9300FBPH",
901            "status": "preview"
902        },
903        {
904            "@id": "/multiplexed-samples/IGVFSM6503EIGD/",
905            "accession": "IGVFSM6503EIGD",
906            "status": "preview"
907        },
908        {
909            "@id": "/multiplexed-samples/IGVFSM8908NMRB/",
910            "accession": "IGVFSM8908NMRB",
911            "status": "preview"
912        },
913        {
914            "@id": "/multiplexed-samples/IGVFSM1185QWRL/",
915            "accession": "IGVFSM1185QWRL",
916            "status": "preview"
917        },
918        {
919            "@id": "/multiplexed-samples/IGVFSM4281HPKU/",
920            "accession": "IGVFSM4281HPKU",
921            "status": "preview"
922        },
923        {
924            "@id": "/multiplexed-samples/IGVFSM1534PPUU/",
925            "accession": "IGVFSM1534PPUU",
926            "status": "preview"
927        },
928        {
929            "@id": "/multiplexed-samples/IGVFSM2159KBCQ/",
930            "accession": "IGVFSM2159KBCQ",
931            "status": "preview"
932        },
933        {
934            "@id": "/multiplexed-samples/IGVFSM9317XZBG/",
935            "accession": "IGVFSM9317XZBG",
936            "status": "preview"
937        },
938        {
939            "@id": "/multiplexed-samples/IGVFSM0965JCVG/",
940            "accession": "IGVFSM0965JCVG",
941            "status": "preview"
942        },
943        {
944            "@id": "/multiplexed-samples/IGVFSM6589HBYD/",
945            "accession": "IGVFSM6589HBYD",
946            "status": "preview"
947        },
948        {
949            "@id": "/multiplexed-samples/IGVFSM5440WCSX/",
950            "accession": "IGVFSM5440WCSX",
951            "status": "preview"
952        },
953        {
954            "@id": "/multiplexed-samples/IGVFSM9948JMCE/",
955            "accession": "IGVFSM9948JMCE",
956            "status": "preview"
957        },
958        {
959            "@id": "/multiplexed-samples/IGVFSM2298FJZK/",
960            "accession": "IGVFSM2298FJZK",
961            "status": "preview"
962        },
963        {
964            "@id": "/multiplexed-samples/IGVFSM4592JTZF/",
965            "accession": "IGVFSM4592JTZF",
966            "status": "preview"
967        },
968        {
969            "@id": "/multiplexed-samples/IGVFSM7205BZYS/",
970            "accession": "IGVFSM7205BZYS",
971            "status": "preview"
972        },
973        {
974            "@id": "/multiplexed-samples/IGVFSM1273LHSM/",
975            "accession": "IGVFSM1273LHSM",
976            "status": "preview"
977        },
978        {
979            "@id": "/multiplexed-samples/IGVFSM3393RSBM/",
980            "accession": "IGVFSM3393RSBM",
981            "status": "preview"
982        }
983    ],
984    "origin_of": [],
985    "parts": [],
986    "pmi": 300,
987    "pmi_units": "minute",
988    "pooled_in": [],
989    "preservation_method": "flash-freezing",
990    "protocols": [
991        "https://www.protocols.io/view/isolation-of-nuclei-from-frozen-tissue-for-snmulti-6uchesw"
992    ],
993    "sample_terms": [
994        {
995            "@id": "/sample-terms/UBERON_0002038/",
996            "status": "preview",
997            "term_name": "substantia nigra"
998        }
999    ],
1000    "schema_version": "21",
1001    "sex": "female",
1002    "sorted_fractions": [],
1003    "sources": [
1004        {
1005            "@id": "/sources/banner-health/",
1006            "status": "released",
1007            "title": "Banner Health"
1008        }
1009    ],
1010    "status": "preview",
1011    "submitted_by": {
1012        "@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
1013        "title": "Ryan Corces"
1014    },
1015    "summary": "Homo sapiens (female, 84 years) substantia nigra tissue associated with Parkinson's disease, mild cognitive impairment",
1016    "taxa": "Homo sapiens",
1017    "upper_bound_age": 84,
1018    "upper_bound_age_in_hours": 735840,
1019    "uuid": "2d9acb87-229d-475a-bf02-80117c6dd87f",
1020    "virtual": false
1021}