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substantia nigra — IGVFSM0558XXEJ

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This object is in preview status. Metadata is subject to change until this object is released.
Summary
Homo sapiens (male, 75 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy
Sample Terms
Sex
male
Age
75 years
Post-mortem Interval
193 minutes
Preservation Method
flash-freezing
Taxa
Homo sapiens
Sources
banner-health
Date Harvested
November 3, 2022
Aliases
igvf:corces_tissue_BANN2149_SN
Protocols
Attribution
Ryan Corces, Gladstone Institute UCSF

Donors

1 item
Accession
Aliases
Sex
Taxa
  • igvf:corces_donor_BANN2149
male
Homo sapiens

File Sets

48 items
single-nucleus RNA sequencing assay (10x multiome)
  • igvf:corces_measurementSet_X013_G5_RNA
Ryan Corces, Gladstone Institute UCSF
single-nucleus ATAC-seq (10x multiome)
  • igvf:corces_measurementSet_X013_G8_ATAC
Ryan Corces, Gladstone Institute UCSF
single-nucleus RNA sequencing assay (10x multiome)
  • igvf:corces_measurementSet_RP032_G4_RNA
Ryan Corces, Gladstone Institute UCSF
single-nucleus ATAC-seq (10x multiome)
  • igvf:corces_measurementSet_X013_G2_ATAC
Ryan Corces, Gladstone Institute UCSF
single-nucleus ATAC-seq (10x multiome)
  • igvf:corces_measurementSet_RP011_G4_ATAC
Ryan Corces, Gladstone Institute UCSF
single-nucleus ATAC-seq (10x multiome)
  • igvf:corces_measurementSet_RP011_G6_ATAC
Ryan Corces, Gladstone Institute UCSF
single-nucleus RNA sequencing assay (10x multiome)
  • igvf:corces_measurementSet_X013_G7_RNA
Ryan Corces, Gladstone Institute UCSF
single-nucleus RNA sequencing assay (10x multiome)
  • igvf:corces_measurementSet_RP011_G3_RNA
Ryan Corces, Gladstone Institute UCSF
single-nucleus ATAC-seq (10x multiome)
  • igvf:corces_measurementSet_RP032_G6_ATAC
Ryan Corces, Gladstone Institute UCSF
single-nucleus RNA sequencing assay (10x multiome)
  • igvf:corces_measurementSet_RP032_G8_RNA
Ryan Corces, Gladstone Institute UCSF

Multiplexed In Samples

24 items
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male, 75 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (male, 83 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples
MultiplexedSample
multiplexed sample: Homo sapiens (male, 53 years) middle temporal gyrus tissue; Homo sapiens (male, 75 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 14 more samples
MultiplexedSample
multiplexed sample: Homo sapiens (male, 53 years) middle temporal gyrus tissue; Homo sapiens (male, 75 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 14 more samples
MultiplexedSample
multiplexed sample: Homo sapiens (male, 75 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (male, 83 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples
MultiplexedSample
multiplexed sample: Homo sapiens (female, 83 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (male, 75 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 6 more samples
MultiplexedSample
multiplexed sample: Homo sapiens (female, 83 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (male, 75 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 6 more samples
MultiplexedSample
multiplexed sample: Homo sapiens (male, 53 years) middle temporal gyrus tissue; Homo sapiens (male, 75 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 14 more samples
MultiplexedSample
multiplexed sample: Homo sapiens (male, 53 years) middle temporal gyrus tissue; Homo sapiens (male, 75 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 14 more samples
MultiplexedSample
multiplexed sample: Homo sapiens (male, 75 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (male, 83 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples
MultiplexedSample
multiplexed sample: Homo sapiens (female, 83 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (male, 75 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 6 more samples