middle temporal gyrus — IGVFSM0369CDVZ

1{
2    "@context": "/terms/",
3    "@id": "/tissues/IGVFSM0369CDVZ/",
4    "@type": [
5        "Tissue",
6        "Biosample",
7        "Sample",
8        "Item"
9    ],
10    "accession": "IGVFSM0369CDVZ",
11    "age": "53",
12    "age_units": "year",
13    "aliases": [
14        "igvf:corces_tissue_BANN0950_MTG"
15    ],
16    "audit": {
17        "INTERNAL_ACTION": [
18            {
19                "category": "missing CCF ID",
20                "detail": "Tissue [IGVFSM0369CDVZ](/tissues/IGVFSM0369CDVZ/) is missing a `ccf_id`. Human tissues are expected to specify a common coordinate framework identifier (CCF ID).",
21                "level": 30,
22                "level_name": "INTERNAL_ACTION",
23                "name": "audit_tissue_ccf_id",
24                "path": "/tissues/IGVFSM0369CDVZ/"
25            }
26        ]
27    },
28    "award": {
29        "@id": "/awards/HG012076/",
30        "component": "mapping"
31    },
32    "classifications": [
33        "tissue"
34    ],
35    "creation_timestamp": "2025-03-19T04:15:29.346818+00:00",
36    "date_obtained": "2023-03-16",
37    "donors": [
38        {
39            "@id": "/human-donors/IGVFDO2928PSUK/",
40            "accession": "IGVFDO2928PSUK",
41            "ethnicities": [
42                "European"
43            ],
44            "status": "preview"
45        }
46    ],
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55            "lab": {
56                "title": "Ryan Corces, Gladstone Institute UCSF"
57            },
58            "preferred_assay_title": "10x multiome",
59            "status": "preview",
60            "summary": "single-nucleus ATAC-seq (10x multiome)"
61        },
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73            "status": "preview",
74            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
75        },
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102            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
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116            "summary": "single-nucleus ATAC-seq (10x multiome)"
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125            "lab": {
126                "title": "Ryan Corces, Gladstone Institute UCSF"
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130            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
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140                "title": "Ryan Corces, Gladstone Institute UCSF"
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143            "status": "preview",
144            "summary": "single-nucleus ATAC-seq (10x multiome)"
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154                "title": "Ryan Corces, Gladstone Institute UCSF"
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158            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
159        },
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167            "lab": {
168                "title": "Ryan Corces, Gladstone Institute UCSF"
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171            "status": "preview",
172            "summary": "single-nucleus ATAC-seq (10x multiome)"
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182                "title": "Ryan Corces, Gladstone Institute UCSF"
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196                "title": "Ryan Corces, Gladstone Institute UCSF"
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200            "summary": "single-nucleus ATAC-seq (10x multiome)"
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210                "title": "Ryan Corces, Gladstone Institute UCSF"
211            },
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214            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
215        },
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223            "lab": {
224                "title": "Ryan Corces, Gladstone Institute UCSF"
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228            "summary": "single-nucleus ATAC-seq (10x multiome)"
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238                "title": "Ryan Corces, Gladstone Institute UCSF"
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241            "status": "preview",
242            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
243        },
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251            "lab": {
252                "title": "Ryan Corces, Gladstone Institute UCSF"
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255            "status": "preview",
256            "summary": "single-nucleus ATAC-seq (10x multiome)"
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266                "title": "Ryan Corces, Gladstone Institute UCSF"
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280                "title": "Ryan Corces, Gladstone Institute UCSF"
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283            "status": "preview",
284            "summary": "single-nucleus ATAC-seq (10x multiome)"
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294                "title": "Ryan Corces, Gladstone Institute UCSF"
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297            "status": "preview",
298            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
299        },
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307            "lab": {
308                "title": "Ryan Corces, Gladstone Institute UCSF"
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311            "status": "preview",
312            "summary": "single-nucleus ATAC-seq (10x multiome)"
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322                "title": "Ryan Corces, Gladstone Institute UCSF"
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325            "status": "preview",
326            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
327        },
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335            "lab": {
336                "title": "Ryan Corces, Gladstone Institute UCSF"
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339            "status": "preview",
340            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
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350                "title": "Ryan Corces, Gladstone Institute UCSF"
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354            "summary": "single-nucleus ATAC-seq (10x multiome)"
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364                "title": "Ryan Corces, Gladstone Institute UCSF"
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368            "summary": "single-nucleus ATAC-seq (10x multiome)"
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378                "title": "Ryan Corces, Gladstone Institute UCSF"
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382            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
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392                "title": "Ryan Corces, Gladstone Institute UCSF"
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406                "title": "Ryan Corces, Gladstone Institute UCSF"
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420                "title": "Ryan Corces, Gladstone Institute UCSF"
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462                "title": "Ryan Corces, Gladstone Institute UCSF"
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466            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
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476                "title": "Ryan Corces, Gladstone Institute UCSF"
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493            "status": "preview",
494            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
495        }
496    ],
497    "institutional_certificates": [
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500            "certificate_identifier": "IP115-05",
501            "controlled_access": false,
502            "status": "in progress"
503        }
504    ],
505    "lab": {
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507        "title": "Ryan Corces, Gladstone Institute UCSF"
508    },
509    "lower_bound_age": 53,
510    "lower_bound_age_in_hours": 464280,
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537        {
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550            "status": "preview"
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552        {
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555            "status": "preview"
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557        {
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562        {
563            "@id": "/multiplexed-samples/IGVFSM0643EUKR/",
564            "accession": "IGVFSM0643EUKR",
565            "status": "preview"
566        },
567        {
568            "@id": "/multiplexed-samples/IGVFSM5471WRIH/",
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570            "status": "preview"
571        },
572        {
573            "@id": "/multiplexed-samples/IGVFSM4137SEKT/",
574            "accession": "IGVFSM4137SEKT",
575            "status": "preview"
576        },
577        {
578            "@id": "/multiplexed-samples/IGVFSM9332LJBD/",
579            "accession": "IGVFSM9332LJBD",
580            "status": "preview"
581        },
582        {
583            "@id": "/multiplexed-samples/IGVFSM9347ZBKI/",
584            "accession": "IGVFSM9347ZBKI",
585            "status": "preview"
586        },
587        {
588            "@id": "/multiplexed-samples/IGVFSM3747QRCH/",
589            "accession": "IGVFSM3747QRCH",
590            "status": "preview"
591        }
592    ],
593    "origin_of": [],
594    "parts": [],
595    "pmi": 220,
596    "pmi_units": "minute",
597    "pooled_in": [],
598    "preservation_method": "flash-freezing",
599    "protocols": [
600        "https://www.protocols.io/view/isolation-of-nuclei-from-frozen-tissue-for-snmulti-6uchesw"
601    ],
602    "sample_terms": [
603        {
604            "@id": "/sample-terms/UBERON_0002771/",
605            "status": "preview",
606            "term_name": "middle temporal gyrus"
607        }
608    ],
609    "schema_version": "21",
610    "sex": "male",
611    "sorted_fractions": [],
612    "sources": [
613        {
614            "@id": "/sources/banner-health/",
615            "status": "released",
616            "title": "Banner Health"
617        }
618    ],
619    "status": "preview",
620    "submitted_by": {
621        "@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
622        "title": "Ryan Corces"
623    },
624    "summary": "Homo sapiens (male, 53 years) middle temporal gyrus tissue",
625    "taxa": "Homo sapiens",
626    "upper_bound_age": 53,
627    "upper_bound_age_in_hours": 464280,
628    "uuid": "be308e80-f438-4b20-afd1-aec4ab69e71c",
629    "virtual": false
630}