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putamen — IGVFSM0142WPWX
putamen — IGVFSM0142WPWX
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Summary
Homo sapiens (female, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy
Sample Terms
putamen
Sex
female
Age
83 years
Post-mortem Interval
720 minutes
Preservation Method
flash-freezing
Taxa
Homo sapiens
Sources
banner-health
Date Harvested
February 13, 2023
Aliases
igvf:corces_tissue_BANN9917_PUT
Protocols
https://www.protocols.io/view/isolation-of-nuclei-from-frozen-tissue-for-snmulti-6uchesw
Attribution
Ryan Corces, Gladstone Institute UCSF
(
HG012076
—
Ansuman Satpathy
)
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO7095OCLJ
igvf:corces_donor_BANN9917
female
Homo sapiens
File Sets
28 items
1
2
3
Accession
Summary
Aliases
Lab
IGVFDS0591ZXQW
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_X036_G7_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS0749RBHU
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_X036_G6_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS1696QREL
single-nucleus RNA sequencing assay (10x multiome)
igvf:corces_measurementSet_X036_G5_RNA
Ryan Corces, Gladstone Institute UCSF
IGVFDS1818PYSX
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_X036_G4_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS1836FIIK
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_X036_G8_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS1869XCPD
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_RP018_G2_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS2109BZLJ
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_X036_G2_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS2371MSDM
single-nucleus RNA sequencing assay (10x multiome)
igvf:corces_measurementSet_RP018_G6_RNA
Ryan Corces, Gladstone Institute UCSF
IGVFDS2873YXDP
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_RP018_G3_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS3371UYOY
single-nucleus RNA sequencing assay (10x multiome)
igvf:corces_measurementSet_RP018_G2_RNA
Ryan Corces, Gladstone Institute UCSF
Multiplexed In Samples
14 items
1
2
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM0275PBUR
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (female, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 82 years) middle temporal gyrus tissue associated with cerebral amyloid angiopathy; ... and 10 more samples
IGVFSM0887BJSQ
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
cerebral amyloid angiopathy
,
Parkinson's disease
multiplexed sample: Homo sapiens (female, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (male, 81 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples
IGVFSM1416OTQT
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (female, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 82 years) middle temporal gyrus tissue associated with cerebral amyloid angiopathy; ... and 10 more samples
IGVFSM2877SEAA
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
cerebral amyloid angiopathy
,
Parkinson's disease
multiplexed sample: Homo sapiens (female, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (male, 81 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples
IGVFSM3143GHVU
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (female, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 82 years) middle temporal gyrus tissue associated with cerebral amyloid angiopathy; ... and 10 more samples
IGVFSM4264GFJZ
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
cerebral amyloid angiopathy
,
Parkinson's disease
multiplexed sample: Homo sapiens (female, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (male, 81 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples
IGVFSM4716JFLW
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (female, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 82 years) middle temporal gyrus tissue associated with cerebral amyloid angiopathy; ... and 10 more samples
IGVFSM5231ZGKX
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
cerebral amyloid angiopathy
,
Parkinson's disease
multiplexed sample: Homo sapiens (female, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (male, 81 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples
IGVFSM5388VXZF
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
cerebral amyloid angiopathy
,
Parkinson's disease
multiplexed sample: Homo sapiens (female, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (male, 81 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples
IGVFSM7137MKTX
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (female, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 82 years) middle temporal gyrus tissue associated with cerebral amyloid angiopathy; ... and 10 more samples