Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
TabularFile
/
IGVFFI1236SEPK
IGVFFI1236SEPK
released
validated
Json view
File Set
IGVFDS0257SDNV
(functional effect prediction on scope of loci)
Summary
GRCh38 predictive variant effects
Analysis Step Version
/analysis-step-versions/3a0aa334-d1d6-43bd-92d0-6f66a0e5eae1/
File Format
bed
Content Type
variant effects
Aliases
andrew-allen:bluestarr-k562-filtered-0.1-prediction-file
md5sum
7f35494fc7eb8708d3875ffe216ee376
Content MD5sum
ff577e95dacdfcb74a408239cbfeed12
File Size
58 MB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/raw_data/predictive_modeling/ver3-effects-all-filtered-min0.1.spdi.v2.bed.gz
Reference Source Details
Genome Assembly
GRCh38
File Format Specifications
1 item
Page
Description
Type
Download
Preview
File format specification of BlueSTARR
file format specification
BlueSTARR output file format v2.pdf
Download BlueSTARR output file format v2.pdf
Download BlueSTARR output file format v2.pdf
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7883WOIS
InVitroSystem
K562
virtual K562 cell line, female, Homo sapiens
Files This File Derives From
1 item
Accession
File Set
File Format
Content Type
Lab
File Size
Upload Status
IGVFFI7272QBOC
IGVFDS0257SDNV
bed
variant effects
Bill Majoros, Duke
1.8 GB
validated
Attribution
Award
HG011967
Principal Investigator(s)
Andrew Allen
,
David Page
,
Bill Majoros
Contact P.I.
Andrew Allen
Lab
Bill Majoros, Duke