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IGVFFI4106YTGZ

released
validated
File Set
IGVFDS7801YPEU(scATAC-seq)
Summary
GRCm39 filtered normalized unstranded signal
Analysis Step Version
/analysis-step-versions/4b52b7fa-e00e-4fc8-b653-ab0ca32174ba/
File Format
bigWig
Content Type
signal
Content Summary
filtered normalized unstranded signal
Aliases
jay-shendure:scATAC_mEBs_bigwig_ex_endo_visceral
md5sum
3527dba94878c74f585c22c647c6f211
File Size
87 MB
Submitted File Name
/net/shendure/vol8/projects/JBL/GEO_scATAC_EB_correction_nobackup/bigwigs/ex_endo_visceral-TileSize-50-normMethod-ReadsInTSS-ArchR_mm39.bw
Checkfiles Version
Legacy version of checkfiles
Attribution
Jay Shendure, UW

Signal Details

Strand Specificity
unstranded
Filtered
True
Normalized
True
Genome Assembly
GRCm39

Samples

4 items
Sample Terms
Summary
InVitroSystem
Mus musculus WD44 (male) mouse embryonic stem differentiated cell specimen induced to embryoid body for 21 days (cellular sub pool: 10XlaneB)
InVitroSystem
Mus musculus WD44 (male) mouse embryonic stem differentiated cell specimen induced to embryoid body for 21 days (cellular sub pool: 10XlaneB)
InVitroSystem
Mus musculus WD44 (male) mouse embryonic stem differentiated cell specimen induced to embryoid body for 21 days (cellular sub pool: 10XlaneA)
InVitroSystem
Mus musculus WD44 (male) mouse embryonic stem differentiated cell specimen induced to embryoid body for 21 days (cellular sub pool: 10XlaneA)

Files This File Derives From

1 item
Accession
File Set
File Format
Content Type
Lab
File Size
Upload Status
tsv
peaks
Jay Shendure, UW
2.7 MB
validated

Reference Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
fasta
genome reference
GRCm39 genome reference
External Lab, Community
871 MB
validated