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INDEXED
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SequenceFile
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IGVFFI9811QIHQ
IGVFFI9811QIHQ
released
validated
Json view
File Set
IGVFDS5864UGFT
(untransfected prime editing Variant-EFFECTS)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-THP1-PE2_Exp2_NegControl-PCRrep1_R1
md5sum
48adc1d07989192417a825a3904b0dfc
Content MD5sum
09ff0dc6232de9ade57d683c894e8885
File Size
4.5 MB
Submitted File Name
230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrepNA-BinNeg-PCRrep1_S393_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jesse Engreitz, Stanford
(
HG011972
—
Jesse Engreitz
)
Sequencing Details
Sequencing Platform
Illumina NextSeq 550
Sequencing Run
1
Illumina Read Type
R1
Index
AGGTAAGG:TTGT
Average Read Length
150
Read Count
156134
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7075RRIN
InVitroSystem
THP-1
Homo sapiens (male) THP-1 cell line modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2)