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INDEXED
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SequenceFile
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IGVFFI9268FKDT
IGVFFI9268FKDT
released
validated
Json view
File Set
IGVFDS5169NLGU
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4354
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4354_R1
md5sum
161ae952d900dfcec05989843257e6e5
Content MD5sum
021d6cdd8dc70c096e272f81407ee4ed
File Size
1.4 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-562_L1_SS-PKR-208_SS-V1-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4354
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
21960481
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0807FQSL
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 208)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI0863WUGP
yaml
seqspec
seqspec of IGVFFI9268FKDT, IGVFFI5794GAAS, IGVFFI2915WHAM
Jason Buenrostro, Broad
1.3 KB
validated