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IGVFFI8376EUAE

released
validated
File Set
IGVFDS6493BIXB(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 1558
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1558_R1
buenrostro-bernstein:SS-LS_1558_R1
md5sum
b1d7520bd1b1025f5ca4b9ed81b2bd9a
Content MD5sum
fb50902848ce70163732d9611f0ed1f8
File Size
1.1 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1151_L2_SS-PKR-8_SS-V1-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1558
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
54959076

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
Homo sapiens (female, 19 years) bone marrow cell (cellular sub pool: SS-PKR 8)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated