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INDEXED
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SequenceFile
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IGVFFI7413YXTY
IGVFFI7413YXTY
released
validated
Json view
File Set
IGVFDS5169NLGU
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 3857
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3857_R1
md5sum
f5839a5620a253b400e87eccc5daad7d
Content MD5sum
880717a5e6a6d667d770ac053639b689
File Size
523 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-794_L4_SS-PKR-208_SS-V1-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
3857
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
9674273
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0807FQSL
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 208)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5240ARBX
yaml
seqspec
seqspec of IGVFFI7413YXTY, IGVFFI1837BFWP, IGVFFI2625BLBT
Jason Buenrostro, Broad
1.3 KB
validated