Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
ReferenceFile
File Details
File Set
Sample
Provenance
Quality
Clear All
Click and hold a term momentarily to select items
without
that term.
Content Type
All
None
Clear term filter
regulatory_regions
414
variants_variants
184
variants
27
variants_regulatory_regions
27
coding_variants
25
ontology_terms
15
elements reference
6
genome reference
5
proteins
5
transcriptome reference
5
See all 33 terms
File Format
All
None
bed
441
csv
192
vcf
52
owl
12
tsv
12
txt
12
fasta
10
tar
6
gtf
5
dat
4
gaf
4
obo
1
xml
1
File Format Type
All
None
bed3+
434
bed9+
3
mpra_starr
3
bed6
1
Assembly
All
None
GRCh38
710
GRCm39
6
custom
5
mm10
1
Transcriptome Annotation
All
None
GENCODE 43
1
GENCODE M32
1
GENCODE M33
1
Status
released
25 Items
100 Items
300 Items
752 items
1
2
3
4
5
31
ReferenceFile
IGVFFI5380STZG
bed - regulatory_regions - GRCh38
ENCODE Project, NHGRI
File Set
Homo sapiens GRCh38 external data for catalog
released
validated
ReferenceFile
IGVFFI2708NZUX
csv - variants_variants - GRCh38
External Lab, Community
File Set
Homo sapiens GRCh38 external data for catalog
released
validated
ReferenceFile
IGVFFI9807JOKT
gaf - go_terms_proteins
External Lab, Community
File Set
Mus musculus external data for catalog
released
validated
ReferenceFile
IGVFFI9917XVXW
bed - regulatory_regions - GRCh38
ENCODE Project, NHGRI
File Set
Homo sapiens GRCh38 external data for catalog
released
validated
ReferenceFile
IGVFFI9250AWFY
csv - variants_variants - GRCh38
External Lab, Community
File Set
Homo sapiens GRCh38 external data for catalog
released
validated
ReferenceFile
IGVFFI2047LYZP
bed - regulatory_regions - GRCh38
ENCODE Project, NHGRI
File Set
Homo sapiens GRCh38 external data for catalog
released
validated
ReferenceFile
IGVFFI0052OQAV
bed - regulatory_regions - GRCh38
ENCODE Project, NHGRI
File Set
Homo sapiens GRCh38 external data for catalog
released
validated
ReferenceFile
IGVFFI9673DOVK
bed - variants_regulatory_regions - GRCh38
ENCODE Project, NHGRI
File Set
Homo sapiens GRCh38 external data for catalog
released
validated
ReferenceFile
IGVFFI4973IJAM
bed - variants_regulatory_regions - GRCh38
ENCODE Project, NHGRI
File Set
Homo sapiens GRCh38 external data for catalog
released
validated
ReferenceFile
IGVFFI1681NTHN
csv - variants_variants - GRCh38
External Lab, Community
File Set
Homo sapiens GRCh38 external data for catalog
released
validated
ReferenceFile
IGVFFI2572CZXG
csv - variants_variants - GRCh38
External Lab, Community
File Set
Homo sapiens GRCh38 external data for catalog
released
validated
ReferenceFile
IGVFFI5597HANF
bed - regulatory_regions - GRCh38
ENCODE Project, NHGRI
File Set
Homo sapiens GRCh38 external data for catalog
released
validated
ReferenceFile
IGVFFI3392RQSD
bed - variants_regulatory_regions - GRCh38
ENCODE Project, NHGRI
File Set
Homo sapiens GRCh38 external data for catalog
released
validated
ReferenceFile
IGVFFI7373GLQZ
bed - regulatory_regions - GRCh38
ENCODE Project, NHGRI
File Set
Homo sapiens GRCh38 external data for catalog
released
validated
ReferenceFile
IGVFFI4404UDMA
csv - variants_variants - GRCh38
External Lab, Community
File Set
Homo sapiens GRCh38 external data for catalog
released
validated
ReferenceFile
IGVFFI8870ZOTO
gaf - go_terms_proteins - GRCh38
External Lab, Community
File Set
Homo sapiens GRCh38 external data for catalog
released
validated
ReferenceFile
IGVFFI1245XCRR
bed - variants_regulatory_regions - GRCh38
ENCODE Project, NHGRI
File Set
Homo sapiens GRCh38 external data for catalog
released
validated
ReferenceFile
IGVFFI2292ULMJ
csv - variants_variants - GRCh38
External Lab, Community
File Set
Homo sapiens GRCh38 external data for catalog
released
validated
ReferenceFile
IGVFFI0988WOWT
bed - regulatory_regions - GRCh38
ENCODE Project, NHGRI
File Set
Homo sapiens GRCh38 external data for catalog
released
validated
ReferenceFile
IGVFFI2340UWEA
bed - regulatory_regions - GRCh38
ENCODE Project, NHGRI
File Set
Homo sapiens GRCh38 external data for catalog
released
validated
ReferenceFile
IGVFFI8382NAWY
bed - regulatory_regions - GRCh38
ENCODE Project, NHGRI
File Set
Homo sapiens GRCh38 external data for catalog
released
validated
ReferenceFile
IGVFFI1568NXGF
csv - variants_variants - GRCh38
External Lab, Community
File Set
Homo sapiens GRCh38 external data for catalog
released
validated
ReferenceFile
IGVFFI1454UUGM
bed - variants_regulatory_regions - GRCh38
ENCODE Project, NHGRI
File Set
Homo sapiens GRCh38 external data for catalog
released
validated
ReferenceFile
IGVFFI6011WMWD
bed - regulatory_regions - GRCh38
ENCODE Project, NHGRI
File Set
Homo sapiens GRCh38 external data for catalog
released
validated
ReferenceFile
IGVFFI6017SFTI
csv - variants_variants - GRCh38
External Lab, Community
File Set
Homo sapiens GRCh38 external data for catalog
released
validated