lipid-conjugated oligo sequencing for single-nucleus RNA sequencing assay (10x multiome with MULTI-seq), single-nucleus ATAC-seq (10x multiome with MULTI-seq)
released
AuxiliarySet
IGVFDS8473JDSO
quantification DNA barcode sequencing
Jay Shendure, UW
Summary
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
AuxiliarySet
IGVFDS8561MVXS
lipid-conjugated oligo sequencing
Ansuman Satpathy, Stanford
Summary
lipid-conjugated oligo sequencing for single-nucleus RNA sequencing assay (10x multiome with MULTI-seq), single-nucleus ATAC-seq (10x multiome with MULTI-seq)
released
AuxiliarySet
IGVFDS8746LSXO
quantification DNA barcode sequencing
Jay Shendure, UW
Summary
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
AuxiliarySet
IGVFDS7833JNUC
cell sorting
Jesse Engreitz, Stanford
Summary
cell sorting for mixed CRISPR FlowFISH screen sorted on the expression of FAM3C integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, mixed CRISPR FlowFISH screen sorted on the expression of FAM3C integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, ... and 4 more measurement sets
released
AuxiliarySet
IGVFDS2370ZRIR
quantification DNA barcode sequencing
Jay Shendure, UW
Summary
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
AuxiliarySet
IGVFDS3480ASIH
quantification DNA barcode sequencing
Jay Shendure, UW
Summary
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
AuxiliarySet
IGVFDS5693MIIK
lipid-conjugated oligo sequencing
Ansuman Satpathy, Stanford
Summary
lipid-conjugated oligo sequencing for single-nucleus RNA sequencing assay (10x multiome with MULTI-seq), single-nucleus ATAC-seq (10x multiome with MULTI-seq)
released
AuxiliarySet
IGVFDS2965JJYR
quantification DNA barcode sequencing
Jay Shendure, UW
Summary
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
AuxiliarySet
IGVFDS9108NLTS
gRNA sequencing
Charles Gersbach, Duke
Summary
gRNA sequencing for CRISPR activation Perturb-seq integrating a guide (sgRNA) library targeting transcription start sites in 24 genes
released
AuxiliarySet
IGVFDS4882ESVG
lipid-conjugated oligo sequencing
Ansuman Satpathy, Stanford
Summary
lipid-conjugated oligo sequencing for single-nucleus RNA sequencing assay (10x multiome with MULTI-seq), single-nucleus ATAC-seq (10x multiome with MULTI-seq)
released
AuxiliarySet
IGVFDS6028VFBK
quantification DNA barcode sequencing
Jay Shendure, UW
Summary
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
AuxiliarySet
IGVFDS1549RKIJ
cell sorting
Jesse Engreitz, Stanford
Summary
cell sorting for mixed CRISPR FlowFISH screen sorted on the expression of CCND1 integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, mixed CRISPR FlowFISH screen sorted on the expression of CCND1 integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, ... and 4 more measurement sets
released
AuxiliarySet
IGVFDS7792HFAY
circularized RNA barcode detection
Jay Shendure, UW
Summary
circularized RNA barcode detection for MPRA (scQer) integrating a reporter library targeting accessible genome regions in many genomic loci
released
AuxiliarySet
IGVFDS7168JGPF
quantification DNA barcode sequencing
Jay Shendure, UW
Summary
quantification DNA barcode sequencing for MPRA (scQer) integrating a reporter library targeting accessible genome regions in many genomic loci
released
AuxiliarySet
IGVFDS9737EJUL
lipid-conjugated oligo sequencing
Ansuman Satpathy, Stanford
Summary
lipid-conjugated oligo sequencing for single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
released
AuxiliarySet
IGVFDS3935KLZM
quantification DNA barcode sequencing
Jay Shendure, UW
Summary
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
AuxiliarySet
IGVFDS2989BOYC
quantification DNA barcode sequencing
Jay Shendure, UW
Summary
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
AuxiliarySet
IGVFDS2891PUQE
lipid-conjugated oligo sequencing
Ansuman Satpathy, Stanford
Summary
lipid-conjugated oligo sequencing for single-nucleus RNA sequencing assay (10x multiome with MULTI-seq), single-nucleus ATAC-seq (10x multiome with MULTI-seq)
released
AuxiliarySet
IGVFDS5763YUNI
lipid-conjugated oligo sequencing
Ansuman Satpathy, Stanford
Summary
lipid-conjugated oligo sequencing for single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
released
AuxiliarySet
IGVFDS2532AVSC
gRNA sequencing
Jay Shendure, UW
Summary
gRNA sequencing for scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci
released
AuxiliarySet
IGVFDS3729YOSL
quantification DNA barcode sequencing
Jay Shendure, UW
Summary
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
AuxiliarySet
IGVFDS2143LCWD
lipid-conjugated oligo sequencing
Ansuman Satpathy, Stanford
Summary
lipid-conjugated oligo sequencing for single-nucleus RNA sequencing assay (10x multiome with MULTI-seq), single-nucleus ATAC-seq (10x multiome with MULTI-seq)
released
AuxiliarySet
IGVFDS6940QNAZ
lipid-conjugated oligo sequencing
Ansuman Satpathy, Stanford
Summary
lipid-conjugated oligo sequencing for single-nucleus RNA sequencing assay (10x multiome with MULTI-seq), single-nucleus ATAC-seq (10x multiome with MULTI-seq)
released
AuxiliarySet
IGVFDS7645MEIE
quantification DNA barcode sequencing
Jay Shendure, UW
Summary
quantification DNA barcode sequencing for MPRA (scQer) integrating a reporter library targeting accessible genome regions in many genomic loci