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Status
released
38 items
  • AnalysisStepVersion
    fbd5e8fb-4206-4b43-92d6-922cdfe1338b
    Version
    External Lab, Community
    Software Versions
    cellranger-v6.0.1
    released
  • AnalysisStepVersion
    f9f6ae88-d515-4e49-9902-deea3cf87703
    Version
    Charles Gersbach, Duke
    Software Versions
    bowtie2-v2.3.5
    released
  • AnalysisStepVersion
    f53cadd0-3e88-4b35-ab64-8e1683998686
    Version
    Charles Gersbach, Duke
    Software Versions
    bamtools-v2.2.3
    released
  • AnalysisStepVersion
    f50466f8-1ed0-4abc-8604-f6668678139f
    Version
    Luca Pinello, MGH
    Software Versions
    crispr-bean-v1.2.8
    released
  • AnalysisStepVersion
    f177d6b8-48b1-4d58-af7c-5c50da2b0e25
    Version
    Andrew Allen, Duke
    Software Versions
    bluestarr-v0.1.1
    released
  • AnalysisStepVersion
    ea59af97-e192-40b0-9699-909a8b3baa56
    Version
    Nadav Ahituv, UCSF
    Software Versions
    mpranalyze-v1.24.0
    released
  • AnalysisStepVersion
    e27a16d2-c700-405f-92c4-89efe1a558ce
    Version
    Jason Buenrostro, Broad
    Software Versions
    fastq-process-v0.9.0, gnu-parallel-v20161222.0.0, samtools-v1.21.0, bowtie2-v2.5.4, bedtools-v2.26.0, tabix-v1.10.2
    released
  • AnalysisStepVersion
    dca2aa98-db85-449c-93f3-3f409a12f051
    Version
    Luca Pinello, MGH
    Software Versions
    crispr-bean-v1.2.8
    released
  • AnalysisStepVersion
    c95d766a-a900-4694-8065-e12651f618ba
    Version
    External Lab, Community
    Software Versions
    bowtie-v1.2.3, samtools-v1.3.0
    released
  • AnalysisStepVersion
    c3d281e0-f647-4d3c-8ed5-710329d183f2
    Version
    Jay Shendure, UW
    Software Versions
    sceptre-v0.9.2
    released
  • AnalysisStepVersion
    c3ad4525-87d0-4d22-9410-f3e616d7cb9c
    Version
    Martin Kircher, BIH
    Software Versions
    mprasnakeflow-quantification-v0.3.0
    released
  • AnalysisStepVersion
    c0fbe877-fa6c-423b-8d56-e600bf8e2859
    Version
    Daniel Bauer, HSCI
    Software Versions
    mageck-v0.5.9.5
    released
  • AnalysisStepVersion
    b4bb30ef-db5c-4314-bc56-a9f536851ec2
    Version
    Jay Shendure, UW
    Software Versions
    shendure-sccrispra-custom-seurat-scripts-v1.0.0
    released
  • AnalysisStepVersion
    a958f5b0-0c40-46ec-82e9-db6b2b849244
    Version
    External Lab, Community
    Software Versions
    cellranger-v6.0.1
    released
  • AnalysisStepVersion
    a6d3968e-0580-4ec7-90a2-541324156967
    Version
    Charles Gersbach, Duke
    Software Versions
    deseq2-v1.36.0
    released
  • AnalysisStepVersion
    886b365e-3105-424a-8972-7476238b54d7
    Version
    Charles Gersbach, Duke
    Software Versions
    samtools-v1.3.1
    released
  • AnalysisStepVersion
    85a076e7-4167-4a08-a523-905fc3ee1b8b
    Version
    Martin Kircher, BIH
    Software Versions
    mprasnakeflow-assignment-v0.3.0
    released
  • AnalysisStepVersion
    84d923e3-9027-4aaf-a611-eff429b4348c
    Version
    Ali Mortazavi, UCI
    Software Versions
    scanpy-v1.10.2
    released
  • AnalysisStepVersion
    7a065c7f-9076-4e55-ae0a-8c0ae1b1c13e
    Version
    Charles Gersbach, Duke
    Software Versions
    hicar-quantification-v1.0.0
    released
  • AnalysisStepVersion
    7575fac5-2297-495f-ad92-000d9acf05f6
    Version
    Ali Mortazavi, UCI
    Software Versions
    kallisto-v0.50.1, bustools-v0.43.2, kb-python-v0.28.2
    released
  • AnalysisStepVersion
    7298947c-9675-4de2-933a-642bde562751
    Version
    Charles Gersbach, Duke
    Software Versions
    samtools-v1.3.0, star-v2.4.1
    released
  • AnalysisStepVersion
    6eedb442-9e3c-4b7f-b666-6b983f47aa15
    Version
    Charles Gersbach, Duke
    Software Versions
    samtools-v1.3.0, macs-v2.1.0
    released
  • AnalysisStepVersion
    6a1d20c7-c92f-47d6-8e3b-5c74b3e8eed2
    Version
    Charles Gersbach, Duke
    Software Versions
    deseq2-v1.36.0
    released
  • AnalysisStepVersion
    699d6738-4033-4afc-b6f3-1d82a80e0b41
    Version
    Ansuman Satpathy, Stanford
    Software Versions
    cellranger-atac-v2.0.0
    released
  • AnalysisStepVersion
    591f5c4d-08fe-4de1-a25a-d3aef0d39567
    Version
    Charles Gersbach, Duke
    Software Versions
    deseq2-v1.36.0
    released