{
"@context": "/terms/",
"@id": "/reference-files/IGVFFI9899BBBF/",
"@type": [
"ReferenceFile",
"File",
"Item"
],
"accession": "IGVFFI9899BBBF",
"assay_titles": [],
"assembly": "GRCh38",
"audit": {
"WARNING": [
{
"category": "missing dbxrefs",
"detail": "Reference file [IGVFFI9899BBBF](/reference-files/IGVFFI9899BBBF/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
"level": 40,
"level_name": "WARNING",
"name": "audit_external_reference_files",
"path": "/reference-files/IGVFFI9899BBBF/"
}
]
},
"award": {
"@id": "/awards/Community/"
},
"collections": [
"IGVF_catalog_beta_v0.2",
"IGVF_catalog_beta_v0.3"
],
"content_md5sum": "63974d0a1b7696c6d4c3f2a7767b1b87",
"content_type": "variants_proteins",
"controlled_access": false,
"creation_timestamp": "2024-04-16T20:57:55.792758+00:00",
"external": true,
"file_format": "csv",
"file_set": {
"@id": "/curated-sets/IGVFDS4757VBVY/",
"accession": "IGVFDS4757VBVY",
"file_set_type": "external data for catalog",
"summary": "Homo sapiens GRCh38 external data for catalog",
"taxa": "Homo sapiens"
},
"file_size": 54093620,
"gene_list_for": [],
"href": "/reference-files/IGVFFI9899BBBF/@@download/IGVFFI9899BBBF.csv.gz",
"input_file_for": [],
"integrated_in": [],
"lab": {
"@id": "/labs/community/",
"title": "External Lab, Community"
},
"loci_list_for": [],
"md5sum": "16b40452ce2bf43877af2eeb22756517",
"notes": "This file was moved from the Cherry lab and award to a community lab and award. This file previously had GVATdb_hg38.csv submitted as external_id, but the property external_id has been now removed.",
"release_timestamp": "2024-05-15T19:03:05.445136+00:00",
"s3_uri": "s3://igvf-files/2024/04/16/3967e73a-a3d0-4703-aaed-5a7ccb6cd602/IGVFFI9899BBBF.csv.gz",
"schema_version": "15",
"status": "released",
"submitted_by": {
"@id": "/users/6bae687f-b77a-46b9-af0e-a02c135cf42e/",
"title": "Meenakshi Kagda"
},
"submitted_file_name": "/home/ubuntu/igvf-catalog-shengcheng/data/samples/GVATdb_hg38.csv.gz",
"summary": "GRCh38 variants_proteins",
"upload_status": "validated",
"uuid": "3967e73a-a3d0-4703-aaed-5a7ccb6cd602"
}