IGVFFI9282QLXO

released
validated
{
    "@context": "/terms/",
    "@id": "/reference-files/IGVFFI9282QLXO/",
    "@type": [
        "ReferenceFile",
        "File",
        "Item"
    ],
    "accession": "IGVFFI9282QLXO",
    "assay_titles": [],
    "assembly": "GRCm39",
    "audit": {
        "WARNING": [
            {
                "category": "missing dbxrefs",
                "detail": "Reference file [IGVFFI9282QLXO](/reference-files/IGVFFI9282QLXO/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_external_reference_files",
                "path": "/reference-files/IGVFFI9282QLXO/"
            }
        ]
    },
    "award": {
        "@id": "/awards/Community/"
    },
    "content_md5sum": "138726da0afd7a0fecdaec668e6ce49d",
    "content_type": "genome reference",
    "controlled_access": false,
    "creation_timestamp": "2023-05-26T17:27:01.537449+00:00",
    "external": true,
    "file_format": "fasta",
    "file_set": {
        "@id": "/curated-sets/IGVFDS5269JTLD/",
        "accession": "IGVFDS5269JTLD",
        "file_set_type": "genome",
        "status": "released",
        "summary": "Mus musculus GRCm39 GENCODE M32 GENCODE M33 genome",
        "taxa": "Mus musculus"
    },
    "file_size": 870543764,
    "gene_list_for": [],
    "href": "/reference-files/IGVFFI9282QLXO/@@download/IGVFFI9282QLXO.fasta.gz",
    "input_file_for": [],
    "integrated_in": [],
    "lab": {
        "@id": "/labs/community/",
        "title": "External Lab, Community"
    },
    "loci_list_for": [],
    "md5sum": "41ace1b7157b98b393746aef5d1287a8",
    "notes": "This file was moved from the Cherry lab and award to a community lab and award.",
    "release_timestamp": "2023-05-30T21:29:40.206413+00:00",
    "s3_uri": "s3://igvf-files/2023/05/26/825e1ca0-ae66-4755-8071-4fb7704c1f45/IGVFFI9282QLXO.fasta.gz",
    "schema_version": "15",
    "source_url": "https://ftp.ebi.ac.uk/pub/databases/gencode/Gencode_mouse/release_M32/",
    "status": "released",
    "submitted_by": {
        "@id": "/users/98fb23d3-0d79-4c3d-981d-01539e6589f1/",
        "title": "Idan Gabdank"
    },
    "submitted_file_name": "GRCm39.genome.fa.gz",
    "summary": "GRCm39 genome reference",
    "upload_status": "validated",
    "uuid": "825e1ca0-ae66-4755-8071-4fb7704c1f45"
}