IGVFFI7969JLFC

released
validated
1{
2    "@context": "/terms/",
3    "@id": "/reference-files/IGVFFI7969JLFC/",
4    "@type": [
5        "ReferenceFile",
6        "File",
7        "Item"
8    ],
9    "accession": "IGVFFI7969JLFC",
10    "aliases": [
11        "igvf:hs-chromap-genome-index-file"
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13    "analysis_step_version": "/analysis-step-versions/2c0f1b58-aa52-4acf-ac75-2fc55da50cd5/",
14    "assay_titles": [],
15    "assembly": "GRCh38",
16    "audit": {
17        "INTERNAL_ACTION": [
18            {
19                "category": "mismatched status",
20                "detail": "Released reference file [IGVFFI7969JLFC](/reference-files/IGVFFI7969JLFC/) has in progress subobject analysis step version [2c0f1b58-aa52-4acf-ac75-2fc55da50cd5](/analysis-step-versions/2c0f1b58-aa52-4acf-ac75-2fc55da50cd5/).",
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23                "name": "audit_item_status",
24                "path": "/reference-files/IGVFFI7969JLFC/"
25            }
26        ]
27    },
28    "award": {
29        "@id": "/awards/Community/"
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31    "checkfiles_version": "v20",
32    "content_md5sum": "54677f4462368aacc409de4bde485f1a",
33    "content_type": "genome index",
34    "controlled_access": false,
35    "creation_timestamp": "2025-03-18T05:18:53.380945+00:00",
36    "derived_from": [
37        "/reference-files/IGVFFI0653VCGH/"
38    ],
39    "description": "human chromap genome index tar.gz output",
40    "external": false,
41    "file_format": "tar",
42    "file_set": {
43        "@id": "/curated-sets/IGVFDS0684CZUK/",
44        "@type": [
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46            "FileSet",
47            "Item"
48        ],
49        "accession": "IGVFDS0684CZUK",
50        "file_set_type": "genome",
51        "status": "released",
52        "summary": "Homo sapiens GRCh38 genome",
53        "taxa": "Homo sapiens"
54    },
55    "file_size": 5742672831,
56    "gene_list_for": [],
57    "href": "/reference-files/IGVFFI7969JLFC/@@download/IGVFFI7969JLFC.tar.gz",
58    "input_file_for": [],
59    "integrated_in": [],
60    "lab": {
61        "@id": "/labs/community/",
62        "title": "External Lab, Community"
63    },
64    "loci_list_for": [],
65    "md5sum": "6b8b31182a137f094c1c893f3db1b681",
66    "quality_metrics": [],
67    "release_timestamp": "2025-03-31T16:59:00.432811+00:00",
68    "s3_uri": "s3://igvf-files/2025/03/18/e097ad39-e272-4a61-9dfd-beedede77651/IGVFFI7969JLFC.tar.gz",
69    "schema_version": "18",
70    "status": "released",
71    "submitted_by": {
72        "@id": "/users/82c1a7c4-3cb1-4f30-9498-8430881a1c0a/",
73        "title": "Zhewei Shen"
74    },
75    "submitted_file_name": "gs://fc-secure-de19fd29-2253-41cd-9751-1788cf7ad1a5/submissions/intermediates/d11fbeb3-94ff-4e6c-b1e3-91c2d7eee97d/generate_chromap_index/2cac0f34-dac0-4298-b195-d5af95a3a2f5/call-chromap/chromap_IGVFFI0653VCGH.tar.gz",
76    "submitter_comment": "human chromap genome index files for single cell uniform pipeline. Reuploaded with local download at /Users/zheweishen/IGVF/Posting/WRN-812/index_files/human/chromap_IGVFFI0653VCGH.tar.gz.",
77    "summary": "GRCh38 genome index",
78    "upload_status": "validated",
79    "uuid": "e097ad39-e272-4a61-9dfd-beedede77651",
80    "workflow": {
81        "@id": "/workflows/IGVFWF7240LYNM/",
82        "name": "igvf-chromap genome index generation",
83        "uniform_pipeline": false
84    }
85}