IGVFFI7936CWLG

archived
validated
{
    "@context": "/terms/",
    "@id": "/reference-files/IGVFFI7936CWLG/",
    "@type": [
        "ReferenceFile",
        "File",
        "Item"
    ],
    "accession": "IGVFFI7936CWLG",
    "assay_titles": [],
    "assembly": "GRCh38",
    "audit": {
        "WARNING": [
            {
                "category": "missing dbxrefs",
                "detail": "Reference file [IGVFFI7936CWLG](/reference-files/IGVFFI7936CWLG/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_external_reference_files",
                "path": "/reference-files/IGVFFI7936CWLG/"
            }
        ]
    },
    "award": {
        "@id": "/awards/Community/"
    },
    "collections": [
        "IGVF_catalog_beta_v0.1",
        "IGVF_catalog_beta_v0.2",
        "IGVF_catalog_beta_v0.3"
    ],
    "content_md5sum": "9d73f944ae2ae9b88a6f739b0306c70f",
    "content_type": "proteins",
    "controlled_access": false,
    "creation_timestamp": "2023-12-06T08:05:17.971501+00:00",
    "external": true,
    "file_format": "dat",
    "file_set": {
        "@id": "/curated-sets/IGVFDS8678JUTA/",
        "accession": "IGVFDS8678JUTA",
        "file_set_type": "external data for catalog",
        "summary": "Homo sapiens GRCh38 external data for catalog",
        "taxa": "Homo sapiens"
    },
    "file_size": 108046188,
    "gene_list_for": [],
    "href": "/reference-files/IGVFFI7936CWLG/@@download/IGVFFI7936CWLG.dat.gz",
    "input_file_for": [],
    "integrated_in": [],
    "lab": {
        "@id": "/labs/community/",
        "title": "External Lab, Community"
    },
    "loci_list_for": [],
    "md5sum": "dd96c065e6f20ae0da49d923aeff0540",
    "notes": "This file was moved from the Cherry lab and award to a community lab and award. This file previously had uniprot_sprot_human.dat.gz submitted as external_id, but the property external_id has been now removed.",
    "release_timestamp": "2023-12-07T05:52:40.694668+00:00",
    "s3_uri": "s3://igvf-files/2023/12/06/575f56f8-36f6-4129-a09d-d9f879f604e2/IGVFFI7936CWLG.dat.gz",
    "schema_version": "15",
    "source_url": "https://ftp.uniprot.org/pub/databases/uniprot/current_release/knowledgebase/taxonomic_divisions/uniprot_sprot_human.dat.gz",
    "status": "archived",
    "submitted_by": {
        "@id": "/users/6bae687f-b77a-46b9-af0e-a02c135cf42e/",
        "title": "Meenakshi Kagda"
    },
    "submitted_file_name": "uniprot_sprot_human.dat.gz",
    "summary": "GRCh38 proteins",
    "upload_status": "validated",
    "uuid": "575f56f8-36f6-4129-a09d-d9f879f604e2"
}