IGVFFI6999YLZG

released
validated
1{
2    "@context": "/terms/",
3    "@id": "/reference-files/IGVFFI6999YLZG/",
4    "@type": [
5        "ReferenceFile",
6        "File",
7        "Item"
8    ],
9    "accession": "IGVFFI6999YLZG",
10    "aliases": [
11        "charles-gersbach:cd8-tcells-TF-CCR7-crispr-screen-grnas-fasta"
12    ],
13    "assay_titles": [],
14    "assembly": "custom",
15    "audit": {
16        "INTERNAL_ACTION": [
17            {
18                "category": "mismatched status",
19                "detail": "Released reference file [IGVFFI6999YLZG](/reference-files/IGVFFI6999YLZG/) has in progress subobject curated set [IGVFDS3913KUFQ](/curated-sets/IGVFDS3913KUFQ/).",
20                "level": 30,
21                "level_name": "INTERNAL_ACTION",
22                "name": "audit_item_status",
23                "path": "/reference-files/IGVFFI6999YLZG/"
24            }
25        ]
26    },
27    "award": {
28        "@id": "/awards/HG012053/",
29        "component": "functional characterization"
30    },
31    "content_md5sum": "18237f63c127cad5d096a0188ac3239b",
32    "content_type": "guide RNA sequences",
33    "controlled_access": false,
34    "creation_timestamp": "2024-10-15T18:32:35.840218+00:00",
35    "external": false,
36    "file_format": "fasta",
37    "file_set": {
38        "@id": "/curated-sets/IGVFDS3913KUFQ/",
39        "@type": [
40            "CuratedSet",
41            "FileSet",
42            "Item"
43        ],
44        "accession": "IGVFDS3913KUFQ",
45        "file_set_type": "guide RNAs",
46        "status": "in progress",
47        "summary": "Homo sapiens GRCh38 custom guide RNAs",
48        "taxa": "Homo sapiens"
49    },
50    "file_size": 20722,
51    "gene_list_for": [],
52    "href": "/reference-files/IGVFFI6999YLZG/@@download/IGVFFI6999YLZG.fasta.gz",
53    "input_file_for": [],
54    "integrated_in": [],
55    "lab": {
56        "@id": "/labs/charles-gersbach/",
57        "title": "Charles Gersbach, Duke"
58    },
59    "loci_list_for": [],
60    "md5sum": "1dbc8c923e15f765efe6494b6a364f91",
61    "quality_metrics": [],
62    "release_timestamp": "2024-11-18T21:33:15.837734+00:00",
63    "s3_uri": "s3://igvf-files/2024/10/15/0977d9e4-7eae-4e8a-a683-bb59d4b9542b/IGVFFI6999YLZG.fasta.gz",
64    "schema_version": "18",
65    "status": "released",
66    "submitted_by": {
67        "@id": "/users/29f5f78d-ac90-421e-90c6-a90e1dc407a7/",
68        "title": "Alejandro Barrera"
69    },
70    "submitted_file_name": "/data/reddylab/Alex/IGVF/data_submissions/reference_data/AIM_2_T_cell_project_1/CRISPR.TF.CCR7.grna.fa.gz",
71    "summary": "custom assembly guide RNA sequences",
72    "upload_status": "validated",
73    "uuid": "0977d9e4-7eae-4e8a-a683-bb59d4b9542b"
74}