IGVFFI6815WBWB

archived
validated
1{
2    "@context": "/terms/",
3    "@id": "/reference-files/IGVFFI6815WBWB/",
4    "@type": [
5        "ReferenceFile",
6        "File",
7        "Item"
8    ],
9    "accession": "IGVFFI6815WBWB",
10    "assay_titles": [],
11    "assembly": "GRCh38",
12    "audit": {},
13    "award": {
14        "@id": "/awards/Community/"
15    },
16    "content_md5sum": "b2aee9f885accc00531e59c4736bee63",
17    "content_type": "genome reference",
18    "controlled_access": false,
19    "creation_timestamp": "2024-11-19T20:35:33.519986+00:00",
20    "description": "GRCh38 genome reference from UCSC",
21    "external": false,
22    "file_format": "fasta",
23    "file_set": {
24        "@id": "/curated-sets/IGVFDS0280IQAI/",
25        "@type": [
26            "CuratedSet",
27            "FileSet",
28            "Item"
29        ],
30        "accession": "IGVFDS0280IQAI",
31        "file_set_type": "genome",
32        "status": "released",
33        "summary": "Homo sapiens GRCh38 GENCODE 43 genome",
34        "taxa": "Homo sapiens"
35    },
36    "file_size": 983659424,
37    "gene_list_for": [],
38    "href": "/reference-files/IGVFFI6815WBWB/@@download/IGVFFI6815WBWB.fasta.gz",
39    "input_file_for": [],
40    "integrated_in": [],
41    "lab": {
42        "@id": "/labs/community/",
43        "title": "External Lab, Community"
44    },
45    "loci_list_for": [],
46    "md5sum": "1c9dcaddfa41027f17cd8f7a82c7293b",
47    "quality_metrics": [],
48    "release_timestamp": "2024-11-22T21:55:45.980136+00:00",
49    "s3_uri": "s3://igvf-files/2024/11/19/8ec0b051-a809-4585-acb5-e0837d89014d/IGVFFI6815WBWB.fasta.gz",
50    "schema_version": "18",
51    "source_url": "https://hgdownload2.soe.ucsc.edu/goldenPath/hg38/bigZips/hg38.fa.gz",
52    "status": "archived",
53    "submitted_by": {
54        "@id": "/users/a2b75182-21bc-4f2b-a090-3394feeca1be/",
55        "title": "Shengcheng Dong"
56    },
57    "submitted_file_name": "hg38.fa.gz",
58    "submitter_comment": "This is the GRCh38 file released with GENCODE v43 it is NOT the official reference",
59    "summary": "GRCh38 genome reference",
60    "upload_status": "validated",
61    "uuid": "8ec0b051-a809-4585-acb5-e0837d89014d"
62}