{
"@context": "/terms/",
"@id": "/reference-files/IGVFFI2997DUKO/",
"@type": [
"ReferenceFile",
"File",
"Item"
],
"accession": "IGVFFI2997DUKO",
"assay_titles": [],
"audit": {
"ERROR": [
{
"category": "upload status not validated",
"detail": "Reference file [IGVFFI2997DUKO](/reference-files/IGVFFI2997DUKO/) has `upload_status` invalidated. Validation error detail: {\"tabular_file_error\": [[6, 16, \"missing-cell\", \"\"], [6, 17, \"missing-cell\", \"\"], [6, 18, \"missing-cell\", \"\"], [6, 19, \"missing-cell\", \"\"], [6, 20, \"missing-cell\", \"\"], [6, 21, \"missing-cell\", \"\"], [6, 22, \"missing-cell\", \"\"], [6, 23, \"missing-cell\", \"\"], [6, 24, \"missing-cell\", \"\"], [10, 16, \"missing-cell\", \"\"]]}. Files are expected to be validated.",
"level": 60,
"level_name": "ERROR",
"name": "audit_upload_status",
"path": "/reference-files/IGVFFI2997DUKO/"
}
]
},
"award": {
"@id": "/awards/Community/"
},
"collections": [
"IGVF_catalog_beta_v0.1",
"IGVF_catalog_beta_v0.2",
"IGVF_catalog_beta_v0.3"
],
"content_md5sum": "f4c99133f75b02dc760c87b59cf808a5",
"content_type": "drugs",
"controlled_access": false,
"creation_timestamp": "2023-11-22T22:08:17.914571+00:00",
"external": false,
"file_format": "tsv",
"file_set": {
"@id": "/curated-sets/IGVFDS3509VPYM/",
"accession": "IGVFDS3509VPYM",
"file_set_type": "external data for catalog",
"summary": "Homo sapiens external data for catalog",
"taxa": "Homo sapiens"
},
"file_size": 772512,
"gene_list_for": [],
"href": "/reference-files/IGVFFI2997DUKO/@@download/IGVFFI2997DUKO.tsv.gz",
"input_file_for": [],
"integrated_in": [],
"lab": {
"@id": "/labs/community/",
"title": "External Lab, Community"
},
"loci_list_for": [],
"md5sum": "a71cf69a4456d07305aa3322838ab9aa",
"notes": "This file was moved from the Cherry lab and award to a community lab and award.",
"release_timestamp": "2023-12-07T05:50:01.726543+00:00",
"s3_uri": "s3://igvf-files/2023/11/22/a08ffed0-1c89-4a56-81b8-9b382e90703c/IGVFFI2997DUKO.tsv.gz",
"schema_version": "14",
"source_url": "https://api.pharmgkb.org/v1/download/file/data/chemicals.zip",
"status": "released",
"submitted_by": {
"@id": "/users/6bae687f-b77a-46b9-af0e-a02c135cf42e/",
"title": "Meenakshi Kagda"
},
"submitted_file_name": "/home/ubuntu/igvf-catalog-shengcheng/data/data_loading_support_files/pharmGKB_chemicals.tsv.gz",
"summary": "drugs",
"upload_status": "invalidated",
"uuid": "a08ffed0-1c89-4a56-81b8-9b382e90703c",
"validation_error_detail": "{\"tabular_file_error\": [[6, 16, \"missing-cell\", \"\"], [6, 17, \"missing-cell\", \"\"], [6, 18, \"missing-cell\", \"\"], [6, 19, \"missing-cell\", \"\"], [6, 20, \"missing-cell\", \"\"], [6, 21, \"missing-cell\", \"\"], [6, 22, \"missing-cell\", \"\"], [6, 23, \"missing-cell\", \"\"], [6, 24, \"missing-cell\", \"\"], [10, 16, \"missing-cell\", \"\"]]}"
}