IGVFFI2401WTHI

{
    "@context": "/terms/",
    "@id": "/reference-files/IGVFFI2401WTHI/",
    "@type": [
        "ReferenceFile",
        "File",
        "Item"
    ],
    "accession": "IGVFFI2401WTHI",
    "aliases": [
        "igvf:ENCFF004ISX"
    ],
    "assay_titles": [],
    "assembly": "GRCh38",
    "audit": {
        "WARNING": [
            {
                "category": "missing dbxrefs",
                "detail": "Reference file [IGVFFI2401WTHI](/reference-files/IGVFFI2401WTHI/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_external_reference_files",
                "path": "/reference-files/IGVFFI2401WTHI/"
            }
        ]
    },
    "award": {
        "@id": "/awards/ENCODE/"
    },
    "collections": [
        "IGVF_catalog_beta_v0.3",
        "IGVF_catalog_beta_v0.2",
        "IGVF_catalog_beta_v0.1",
        "ENCODE"
    ],
    "content_md5sum": "7d0078e659adcdb9b979555d9258ebe7",
    "content_type": "variants_regulatory_regions",
    "controlled_access": false,
    "creation_timestamp": "2023-11-30T07:42:49.190573+00:00",
    "external": true,
    "file_format": "bed",
    "file_format_type": "bed3+",
    "file_set": {
        "@id": "/curated-sets/IGVFDS1922ZNEM/",
        "accession": "IGVFDS1922ZNEM",
        "file_set_type": "external data for catalog",
        "summary": "Homo sapiens GRCh38 external data for catalog",
        "taxa": "Homo sapiens"
    },
    "file_size": 657459,
    "gene_list_for": [],
    "href": "/reference-files/IGVFFI2401WTHI/@@download/IGVFFI2401WTHI.bed.gz",
    "input_file_for": [],
    "integrated_in": [],
    "lab": {
        "@id": "/labs/encode/",
        "title": "ENCODE Project, NHGRI"
    },
    "loci_list_for": [],
    "md5sum": "e203374b3729fc5a42022aa31b47730f",
    "notes": "This file was moved from the Cherry lab and award to a community lab and award. This file previously had ENCFF004ISX submitted as external_id, but the property external_id has been now removed.",
    "release_timestamp": "2023-12-07T05:50:16.631788+00:00",
    "s3_uri": "s3://igvf-files/2023/11/30/6cc33099-d1fd-464e-8a16-7c5f4dc60880/IGVFFI2401WTHI.bed.gz",
    "schema_version": "15",
    "status": "released",
    "submitted_by": {
        "@id": "/users/6bae687f-b77a-46b9-af0e-a02c135cf42e/",
        "title": "Meenakshi Kagda"
    },
    "submitted_file_name": "ENCFF004ISX.bed.gz",
    "summary": "GRCh38 variants_regulatory_regions",
    "upload_status": "validated",
    "uuid": "6cc33099-d1fd-464e-8a16-7c5f4dc60880"
}