{
"@context": "/terms/",
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"ReferenceFile",
"File",
"Item"
],
"accession": "IGVFFI2340UWEA",
"aliases": [
"igvf:ENCFF457JVQ"
],
"assay_titles": [],
"assembly": "GRCh38",
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Released reference file [IGVFFI2340UWEA](/reference-files/IGVFFI2340UWEA/) has in progress subobject curated set [IGVFDS1885ITZM](/curated-sets/IGVFDS1885ITZM/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/reference-files/IGVFFI2340UWEA/"
}
]
},
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],
"content_md5sum": "e66c5dbcfb962847ead4850156e1e83e",
"content_type": "genomic_elements",
"controlled_access": false,
"creation_timestamp": "2023-12-05T21:47:39.641504+00:00",
"dbxrefs": [
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],
"external": true,
"file_format": "bed",
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"file_set": {
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"@type": [
"CuratedSet",
"FileSet",
"Item"
],
"accession": "IGVFDS1885ITZM",
"file_set_type": "external data for catalog",
"samples": [
{
"@id": "/in-vitro-systems/IGVFSM8848EHRV/",
"@type": [
"InVitroSystem",
"Biosample",
"Sample",
"Item"
],
"accession": "IGVFSM8848EHRV",
"classifications": [
"cell line"
],
"sample_terms": [
{
"@id": "/sample-terms/CL_0002548/",
"status": "in progress",
"term_name": "cardiac fibroblast"
}
],
"status": "in progress",
"summary": "virtual Homo sapiens cardiac fibroblast cell line",
"taxa": "Homo sapiens"
}
],
"status": "in progress",
"summary": "Homo sapiens GRCh38 external data for catalog",
"taxa": "Homo sapiens"
},
"file_size": 4189643,
"gene_list_for": [],
"href": "/reference-files/IGVFFI2340UWEA/@@download/IGVFFI2340UWEA.bed.gz",
"input_file_for": [],
"integrated_in": [],
"lab": {
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"title": "ENCODE Project, NHGRI"
},
"loci_list_for": [],
"md5sum": "94660d77dd6457c148485c284a7e1acc",
"notes": "This file was moved from the Cherry lab and award to a community lab and award. This file previously had ENCFF457JVQ submitted as external_id, but the property external_id has been now removed. This file's content_type was regulatory_regions, but has been upgraded to genomic_elements.",
"quality_metrics": [],
"release_timestamp": "2023-12-07T05:51:18.278934+00:00",
"s3_uri": "s3://igvf-files/2023/12/05/f81dc778-f187-4f41-9173-5cead9088e3d/IGVFFI2340UWEA.bed.gz",
"schema_version": "18",
"source_url": "https://www.encodeproject.org/files/ENCFF457JVQ@@download/ENCFF457JVQ.bed.gz",
"status": "released",
"submitted_by": {
"@id": "/users/6bae687f-b77a-46b9-af0e-a02c135cf42e/",
"title": "Meenakshi Kagda"
},
"submitted_file_name": "ENCFF457JVQ.bed.gz",
"summary": "GRCh38 genomic_elements",
"upload_status": "validated",
"uuid": "f81dc778-f187-4f41-9173-5cead9088e3d"
}