IGVFFI0653VCGH

released
validated
1{
2    "@context": "/terms/",
3    "@id": "/reference-files/IGVFFI0653VCGH/",
4    "@type": [
5        "ReferenceFile",
6        "File",
7        "Item"
8    ],
9    "accession": "IGVFFI0653VCGH",
10    "assay_titles": [],
11    "assembly": "GRCh38",
12    "audit": {},
13    "award": {
14        "@id": "/awards/Community/"
15    },
16    "content_md5sum": "a6da8681616c05eb542f1d91606a7b2f",
17    "content_type": "genome reference",
18    "controlled_access": false,
19    "creation_timestamp": "2023-05-26T17:44:39.853728+00:00",
20    "dbxrefs": [
21        "GRC:GRCh38"
22    ],
23    "external": false,
24    "file_format": "fasta",
25    "file_set": {
26        "@id": "/curated-sets/IGVFDS0280IQAI/",
27        "@type": [
28            "CuratedSet",
29            "FileSet",
30            "Item"
31        ],
32        "accession": "IGVFDS0280IQAI",
33        "file_set_type": "genome",
34        "status": "released",
35        "summary": "Homo sapiens GRCh38 GENCODE 43 genome",
36        "taxa": "Homo sapiens"
37    },
38    "file_size": 872949833,
39    "gene_list_for": [],
40    "href": "/reference-files/IGVFFI0653VCGH/@@download/IGVFFI0653VCGH.fasta.gz",
41    "input_file_for": [
42        "/reference-files/IGVFFI9561BASO/",
43        "/reference-files/IGVFFI7969JLFC/",
44        "/reference-files/IGVFFI7399RDTR/",
45        "/reference-files/IGVFFI8853NLMY/",
46        "/reference-files/IGVFFI5709NIJX/",
47        "/reference-files/IGVFFI8119YNTL/",
48        "/reference-files/IGVFFI2936XZCS/",
49        "/reference-files/IGVFFI3258IYJA/",
50        "/reference-files/IGVFFI2361EJJN/",
51        "/reference-files/IGVFFI9486DYHG/",
52        "/reference-files/IGVFFI0330XSFM/",
53        "/reference-files/IGVFFI2448NXLS/",
54        "/reference-files/IGVFFI9761FYQI/",
55        "/reference-files/IGVFFI3681VSQP/",
56        "/reference-files/IGVFFI2386BSYD/",
57        "/reference-files/IGVFFI8247DCCR/",
58        "/reference-files/IGVFFI5861AYEB/",
59        "/reference-files/IGVFFI3969VBYE/",
60        "/reference-files/IGVFFI9195BXCI/",
61        "/reference-files/IGVFFI7070MEEI/"
62    ],
63    "integrated_in": [],
64    "lab": {
65        "@id": "/labs/community/",
66        "title": "External Lab, Community"
67    },
68    "loci_list_for": [],
69    "md5sum": "a08035b6a6e31780e96a34008ff21bd6",
70    "notes": "This file was moved from the Cherry lab and award to a community lab and award.",
71    "quality_metrics": [],
72    "release_timestamp": "2023-05-30T21:16:11.572908+00:00",
73    "s3_uri": "s3://igvf-files/2023/05/26/dd49b369-b6be-4a4b-a3a5-84516a00f9b4/IGVFFI0653VCGH.fasta.gz",
74    "schema_version": "18",
75    "source_url": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/001/405/GCA_000001405.15_GRCh38/seqs_for_alignment_pipelines.ucsc_ids/GCA_000001405.15_GRCh38_no_alt_analysis_set.fna.gz",
76    "status": "released",
77    "submitted_by": {
78        "@id": "/users/98fb23d3-0d79-4c3d-981d-01539e6589f1/",
79        "title": "Idan Gabdank"
80    },
81    "summary": "GRCh38 genome reference",
82    "upload_status": "validated",
83    "uuid": "dd49b369-b6be-4a4b-a3a5-84516a00f9b4"
84}