{
"@context": "/terms/",
"@id": "/reference-files/IGVFFI0402XUTA/",
"@type": [
"ReferenceFile",
"File",
"Item"
],
"accession": "IGVFFI0402XUTA",
"aliases": [
"igvf:ENCFF691PJA"
],
"assay_titles": [],
"assembly": "GRCh38",
"audit": {
"WARNING": [
{
"category": "missing dbxrefs",
"detail": "Reference file [IGVFFI0402XUTA](/reference-files/IGVFFI0402XUTA/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Externally hosted files are expected to have identifiers from external resources in dbxrefs.",
"level": 40,
"level_name": "WARNING",
"name": "audit_external_reference_files",
"path": "/reference-files/IGVFFI0402XUTA/"
}
]
},
"award": {
"@id": "/awards/ENCODE/"
},
"collections": [
"IGVF_catalog_beta_v0.3",
"IGVF_catalog_beta_v0.2",
"IGVF_catalog_beta_v0.1",
"ENCODE"
],
"content_md5sum": "588bc697407cf18ce22d335ad25897cd",
"content_type": "regulatory_regions",
"controlled_access": false,
"creation_timestamp": "2023-12-05T21:50:25.139074+00:00",
"external": true,
"file_format": "bed",
"file_format_type": "bed3+",
"file_set": {
"@id": "/curated-sets/IGVFDS1791VARB/",
"accession": "IGVFDS1791VARB",
"file_set_type": "external data for catalog",
"summary": "Homo sapiens GRCh38 external data for catalog",
"taxa": "Homo sapiens"
},
"file_size": 3597180,
"gene_list_for": [],
"href": "/reference-files/IGVFFI0402XUTA/@@download/IGVFFI0402XUTA.bed.gz",
"input_file_for": [],
"integrated_in": [],
"lab": {
"@id": "/labs/encode/",
"title": "ENCODE Project, NHGRI"
},
"loci_list_for": [],
"md5sum": "930c7b7b6472b68e178a5ea2ae80dde9",
"notes": "This file was moved from the Cherry lab and award to a community lab and award. This file previously had ENCFF691PJA submitted as external_id, but the property external_id has been now removed.",
"release_timestamp": "2023-12-07T05:52:19.600479+00:00",
"s3_uri": "s3://igvf-files/2023/12/05/900e0798-7b81-4026-96be-09585a9c9989/IGVFFI0402XUTA.bed.gz",
"schema_version": "15",
"source_url": "https://www.encodeproject.org/files/ENCFF691PJA@@download/ENCFF691PJA.bed.gz",
"status": "released",
"submitted_by": {
"@id": "/users/6bae687f-b77a-46b9-af0e-a02c135cf42e/",
"title": "Meenakshi Kagda"
},
"submitted_file_name": "ENCFF691PJA.bed.gz",
"summary": "GRCh38 regulatory_regions",
"upload_status": "validated",
"uuid": "900e0798-7b81-4026-96be-09585a9c9989"
}