Single Cell RNA-seq Quality Metric

Schema for submission of a scRNA-seq uniform pipeline quality metric.

Type

Lab specific identifiers to reference an object.

A lab specific identifier to reference an object.

Lab Alias

Aliases

The analysis step version of the quality metric.

Analysis Step Version

File Name

Image Height

Hypertext REFerence

MD5sum

File Size

MIME type

Image Width

Attachment

Award

Creation Timestamp

Description

Duplicate Fraction

Mitochondrial Fraction

Mitochondrial Genes Fraction

Fraction Of Reads In Genes Barcode

Fraction Of Reads In Genes Library

GtRecords

Joint Barcodes Passing

Mean Reads Per Barcode

Mean UMIs Per Barcode

Median Genes Per Barcode

Median Reads Per Barcode

Median UMIs Per Barcode

Number Of Barcode UMIs

Number Of Barcodes

Number Of Genes

Number Of Reads

Number Of Records

Notes

Number Of Barcodes On Onlist

Number Of Reads On Onlist

Percent Duplicates

Percentage Of Barcodes On Onlist

Percentage Of Reads On Onlist

The file(s) to which this quality metric applies.

Quality Metric Of

Release Timestamp

The version of the JSON schema that the server uses to validate the object.

Schema Version

Status

Submitted By

Additional information specified by the submitter to be displayed as a comment on the portal.

Single Cell RNA-seq Quality Metric

Changelog for single_cell_rna_seq_quality_metric.json

Changelog for `single_cell_rna_seq_quality_metric.json`