Single Cell RNA-seq Quality Metric

Changelog for single_cell_rna_seq_quality_metric.json

Schema version 2

• Rename numBarcodesOnOnlist to num_barcodes_on_onlist.
• Rename percentageBarcodesOnOnlist to percentage_barcodes_on_onlist.
• Rename numReadsOnOnlist to num_reads_on_onlist.
• Rename percentageReadsOnOnlist to percentage_reads_on_onlist.
• Rename k-mer length to kmer_length.
• Remove frac_dup.
• Remove frac_mito.
• Remove frac_mito_genes.
• Remove frac_reads_in_genes_barcode.
• Remove frac_reads_in_genes_library.
• Remove joint_barcodes_passing.
• Remove median_genes_per_barcode.
• Remove n_genes.
• Remove pct_duplicates.

Minor changes since schema version 1

• Update aliases regex to add igvf-dacc-processing-pipeline as a namespace.
• Update aliases regex to add steven-gazal as a namespace.
• Update aliases regex to add katie-pollard as a namespace.
• Update aliases regex to add kushal-dey as a namespace.
• Update aliases regex to add stephen-yi as a namespace.
• Add rnaseq_kb_info.
• Add n_targets.
• Add n_bootstraps.
• Add n_processed.
• Add n_pseudoaligned.
• Add n_unique.
• Add p_pseudoaligned.
• Add p_unique.
• Add index_version.
• Add k-mer length.
• Adjust quality_metric_of to allow usage by all users.