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Reference File

Schema Directory
Title
Reference File
Description
A file containing diverse reference related information.
Required
award, content_type, controlled_access, file_format, file_set, lab, md5sum
Identifying Properties
accession, aliases, alternate_accessions, md5sum, uuid
Highlight properties with matching names, “title” attributes, or an enum of those properties. Matching properties might be non-submittable.
array[string]
Lab specific identifiers to reference an object.
linkto
The analysis step version of the file.
string
Genome assembly applicable for the reference data.
linkto
Grant associated with the submission.
string
The type of content in the file.
boolean
Boolean value, indicating the file being controlled access, if true.
array[string]
Identifiers from external resources that may have 1-to-1 or 1-to-many relationships with IGVF file objects.
array[linkto]
The files participating as inputs into software to produce this output file.
boolean
A boolean indicating whether the file has been dervided manually without automated computational methods.
string
A plain text description of the object.
array[linkto]
Documents that provide additional information (not data file).
boolean
Indicates whether the file was obtained from an external, non-IGVF source.
string
The file format or extension of the file.
array[linkto]
Documents that describe the file format and fields of this file.
string
The subtype of bed files.
linkto
The file set that this file belongs to.
integer
File size specified in bytes.
linkto
Lab associated with the submission.
string
The md5sum of the file being transferred.
string
Link to external resource, such as NCBI or GENCODE, where the reference data was obtained.
array[linkto]
The originating lab(s) or vendor(s).
string
Original name of the file.
string
Additional information specified by the submitter to be displayed as a comment on the portal.
string
The annotation and version of the reference resource.