Prediction Set

Changelog for prediction_set.json

Minor changes since schema version 8

• Extend collections enum list to include IGVF_catalog_beta_v0.5.
• Extend status enum list to include preview.
• Rename calculated property input_file_set_for to input_for.
• Extend collections enum list to include VarChAMP.
• Add control_type.
• Add assessed_genes.

Schema version 8

• Remove publication_identifiers.

Minor changes since schema version 7

• Restrict publication_identifiers to submission by admins only.
• Add publications.
• Extend file_set_type enum list to include binding effect.
• Add input_file_sets.
• Extend collections enum list to include Vista.
• Extend collections enum list to include IGVF_catalog_beta_v0.2.
• Extend collections enum list to include IGVF_catalog_beta_v0.3.
• Extend collections enum list to include IGVF_catalog_beta_v0.4.
• Add calculated property input_file_set_for.

Schema version 7

• Require release_timestamp for any objects with released, archived, or revoked status.

Minor changes since schema version 6

• Update aliases regex to add buenrostro-bernstein as a namespace.

Schema version 6

• Remove hg19, mm10, and mm9 from assembly on small_scale_loci_list.

Schema version 5

• Remove genes and loci.

Minor changes since schema version 4

• Add MPRAbase to collections.
• Add ReferenceFile linkTo to large_scale_gene_list and large_scale_loci_list.
• Add calculated submitted_files_timestamp.

Schema version 4

• Rename targeted_genes to genes.
• Rename targeted_loci to loci.
• Add small_scale_gene_list, large_scale_gene_list, small_scale_loci_list, and large_scale_loci_list.
• Restrict genes and loci to submittable by admins only.

Minor changes since schema version 3

• Add release_timestamp.

Schema version 3

• Disallow empty strings in description.
• Allow underscores in the pattern for chromosome in targeted_loci.

Minor changes since schema version 2

• Expand collections enum list to include ClinGen, GREGoR, IGVF_catalog_beta_v0.1, and MaveDB.

Schema version 2

• Require samples or donors.