Extend preferred_assay_title enum list to include ACCESS-ATAC.
Extend preferred_assay_title enum list to include scACCESS-ATAC.
Extend collections enum list to include ACMG73.
Extend collections enum list to include Morphic.
Extend collections enum list to include StanfordFCC.
Extend collections enum list to include IGVF phase 1.
Extend collections enum list to include TOPMED Freeze 8.
Extend collections enum list to include Williams Syndrome Research.
Extend preferred_assay_title enum list to include CRISPR MACS screen.
Extend preferred_assay_title enum list to include scMito-seq.
Extend preferred_assay_title enum list to include WGS.
Extend collections enum list to include IGVF_catalog_beta_v0.5.
Add onlist_files.
Add onlist_method.
Extend preferred_assay_title enum list to include electroporated MPRA.
Extend preferred_assay_title enum list to include varACCESS.
Update calculation of summary.
Schema version 23
Adjust preferred_assay_title enum list to replace Variant FlowFISH with Variant-EFFECTS.
Minor changes since schema version 22
Extend status enum list to include preview.
Extend control_type enum list to include control transduction.
Rename calculated property input_file_set_for to input_for.
Add calculated property externally_hosted.
Extend preferred_assay_title enum list to include HiCAR.
Extend preferred_assay_title enum list to include ONT dRNA.
Extend preferred_assay_title enum list to include ONT Fiber-seq.
Extend preferred_assay_title enum list to include ONT direct WGS.
Extend collections enum list to include VarChAMP.
Schema version 22
Extend preferred_assay_title enum list to include Variant painting via immunostaining.
Extend preferred_assay_title enum list to include Variant painting via fluorescence.
Adjust preferred_assay_title enum list to remove Variant painting.
Minor changes since schema version 21
Extend preferred_assay_title enum list to include VAMP-seq (MultiSTEP).
Add functional_assay_mechanisms.
Extend preferred_assay_title enum list to include STARR-seq.
Schema version 21
Require preferred_assay_title.
Extend preferred_assay_title enum list to include scCRISPR screen.
Schema version 20
Adjust preferred_assay_title enum list to replace CRISPR FlowFISH with CRISPR FlowFISH screen.
Extend preferred_assay_title enum list to include Proliferation CRISPR screen.
Extend preferred_assay_title enum list to include Growth CRISPR screen.
Extend preferred_assay_title enum list to include Migration CRISPR screen.
Extend preferred_assay_title enum list to include CRISPR FACS screen.
Extend preferred_assay_title enum list to include CRISPR mCherry screen.
Extend preferred_assay_title enum list to include HCR-FlowFISH screen.
Minor changes since schema version 19
Add control_type.
Schema version 19
Remove library_construction_platform.
Minor changes since schema version 18
Extend preferred_assay_title enum list to include Spatial transcriptomics.
Schema version 18
Remove publication_identifiers.
Minor changes since schema version 17
Extend preferred_assay_title enum list to include HT-recruit.
Extend preferred_assay_title enum list to include Hi-C.
Restrict publication_identifiers to submission by admins only.
Add publications.
Add targeted_genes.
Add external_image_url.
Schema version 17
Remove readout.
Schema version 16
Restrict samples to 1 item.
Minor changes since schema version 15
Extend collections enum list to include Vista.
Extend collections enum list to include IGVF_catalog_beta_v0.2.
Extend collections enum list to include IGVF_catalog_beta_v0.3.
Extend collections enum list to include IGVF_catalog_beta_v0.4.
Add calculated property input_file_set_for.
Extend preferred_assay_title enum list to include scNT-seq2.
Schema version 15
Require auxiliary_sets to contain at least one value.
Require control_file_sets to contain at least one value.
Require protocols to contain at least one value.
Require sequencing_library_types to contain at least one value.
Schema version 14
Adjust preferred_assay_title enum list to replace histone ChIP-seq with Histone ChIP-seq.
Adjust preferred_assay_title enum list to replace Parse Split-seq with Parse SPLiT-seq.
Adjust preferred_assay_title enum list to replace Saturation genome editing with SGE.
Adjust preferred_assay_title enum list to replace SHARE-Seq with SHARE-seq.
Adjust preferred_assay_title enum list to replace Yeast two-hybrid with Y2H.
Extend preferred_assay_title enum list to include MPRA.
Schema version 13
Require release_timestamp for any objects with released, archived, or revoked status.
Minor changes since schema version 12
Update aliases regex to add buenrostro-bernstein as a namespace.
Add release_timestamp.
Add MPRAbase to collections.
Add ATAC-seq, RNA-seq, TF ChIP-seq, histone ChIP-seq, snRNA-seq, scRNA-seq, snATAC-seq and scATAC-seq to preferred_assay_title.
Add calculated submitted_files_timestamp.
Schema version 12
Replace protocol with protocols.
Schema version 11
Add file_set_type.
Schema version 10
Disallow empty strings in description.
Minor changes since schema version 9
Expand preferred_assay_title enum list to include snM3C-seq.
Schema version 9
Rename sequencing_library_type to sequencing_library_types.
Schema version 8
Change multiome_size to integer type.
Schema version 7
Remove nucleic_acid_delivery, moi, and construct_libraries properties.
Schema version 6
Require samples.
Convert donors to be calculated from samples.
Minor changes since schema version 5
Add publication_identifiers.
Expand preferred_assay_title enum list to include MPRA (scQer), CRISPR FlowFISH, AAV-MPRA, lentiMPRA, semi-qY2H, variant FlowFISH, yN2H, mN2H, CERES-seq, and SUPERSTARR.
Add readout.
Expand preferred_assay_title enum list to include Parse Split-seq.
Add auxiliary_sets.
Restrict nucleic_acid_delivery, moi, and construct_libraries to submittable by admins only. These properties will be moved to Sample objects.
Expand preferred_assay_title enum list to include 10x multiome with MULTI-seq and snMCT-seq.
Expand collections enum list to include ClinGen, GREGoR, IGVF_catalog_beta_v0.1, and MaveDB.
Schema version 5
Remove seqspec.
Minor changes since schema version 4
Expand preferred_assay_title enum list to include 10x multiome and MULTI-seq.
Add nucleic_acid_delivery.
Add files.
Add control_file_sets.
Add control_for.
Add sequencing_library_type.
Expand sequence_library_type enum list to include polyA depleted and polyA enriched.