Curated Set

Changelog for curated_set.json

Minor changes since schema version 8

• Extend collections enum list to include IGVF_catalog_beta_v0.5.
• Extend status enum list to include preview.
• Rename calculated property input_file_set_for to input_for.
• Extend collections enum list to include VarChAMP.
• Add control_type.

Schema version 8

• Remove publication_identifiers.

Minor changes since schema version 7

• Restrict publication_identifiers to submission by admins only.
• Add publications.
• Extend file_set_type enum list to include editing templates.
• Extend collections enum list to include Vista.
• Extend collections enum list to include IGVF_catalog_beta_v0.2.
• Extend collections enum list to include IGVF_catalog_beta_v0.3.
• Extend collections enum list to include IGVF_catalog_beta_v0.4.
• Add calculated property input_file_set_for.

Schema version 7

• Require release_timestamp for any objects with released, archived, or revoked status.

Minor changes since schema version 6

• Update aliases regex to add buenrostro-bernstein as a namespace.
• Add release_timestamp.
• Add MPRAbase to collections.
• Add barcodes to file_set_type.

Schema version 6

• Disallow empty strings in description.

Minor changes since schema version 5

• Rename assembly to assemblies.
• Rename transcriptome_annotation to transcriptome_annotations.
• Expand file_set_type enum list to include external data for catalog.

Schema version 5

• Rename curated_set_type to file_set_type.
• Make samples and donors mutually exclusive.

Minor changes since schema version 4

• Expand collections enum list to include ClinGen, GREGoR, IGVF_catalog_beta_v0.1, and MaveDB.

Schema version 4

• Rename references to publication_identifiers.

Minor changes since schema version 3

• Add files.
• Add dbxrefs.
• Add guide RNAs to curated_set_type.
• Add control_for.

Schema version 3

• Change accessionType to DS

Schema version 2

• Rename sample to samples.
• Rename donor to donors.